Lineage for Protein: (Pro)cathepsin B

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2154577Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2154578Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2154579Family d.3.1.1: Papain-like [54002] (26 protein domains)
  6. 2154580Protein (Pro)cathepsin B [54022] (3 species)

Species:

  1. 2154581Cow (Bos taurus) [TaxId:9913] [54025] (3 PDB entries)
    1. Domain for 1ito:
    2. Domain for 1qdq:
    3. Domain for 1sp4:
  2. 2154585Human (Homo sapiens) [TaxId:9606] [54023] (6 PDB entries)
    1. Domains for 1csb:
      1. 2154591Domain d1csb.1: 1csb A:,B: [37051]
        complexed with ep0
      2. 2154592Domain d1csb.2: 1csb D:,E: [37052]
        complexed with ep0
    2. Domains for 1gmy:
      1. 2154586Domain d1gmya_: 1gmy A: [76236]
        complexed with aem, apd, dfa
      2. 2154587Domain d1gmyb_: 1gmy B: [76237]
        complexed with aem, apd, dfa
      3. 2154588Domain d1gmyc_: 1gmy C: [76238]
        complexed with aem, apd, dfa
    3. Domains for 1huc:
      1. 2154589Domain d1huc.1: 1huc A:,B: [37049]
      2. 2154590Domain d1huc.2: 1huc C:,D: [37050]
    4. Domain for 1pbh:
    5. Domain for 2pbh:
    6. Domain for 3pbh:
  3. 2154596Norway rat (Rattus norvegicus) [TaxId:10116] [54024] (4 PDB entries)
    1. Domains for 1cpj:
      1. 2154601Domain d1cpja_: 1cpj A: [37060]
      2. 2154602Domain d1cpjb_: 1cpj B: [37061]
    2. Domains for 1cte:
      1. 2154599Domain d1ctea_: 1cte A: [37058]
        complexed with pys
      2. 2154600Domain d1cteb_: 1cte B: [37059]
        complexed with pys
    3. Domains for 1mir:
      1. 2154603Domain d1mira_: 1mir A: [37062]
        zymogen
      2. 2154604Domain d1mirb_: 1mir B: [37063]
        zymogen
    4. Domains for 1the:
      1. 2154597Domain d1thea_: 1the A: [37056]
        complexed with 0e6
      2. 2154598Domain d1theb_: 1the B: [37057]
        complexed with 0e6

More info for Protein (Pro)cathepsin B from d.3.1.1: Papain-like

Timeline for Protein (Pro)cathepsin B from d.3.1.1: Papain-like: