| Root: SCOPe 2.08 |
| Class d: Alpha and beta proteins (a+b) [53931] (396 folds) |
| Fold d.3: Cysteine proteinases [54000] (1 superfamily) consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn |
Superfamily d.3.1: Cysteine proteinases [54001] (24 families) ![]() the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet |
| Family d.3.1.1: Papain-like [54002] (26 proteins) |
| Protein Bleomycin hydrolase [54017] (2 species) DNA-binding protease that has more insertions in the papain-like fold |
| Species Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId:4932] [54018] (9 PDB entries) |
| Domain d1a6ra_: 1a6r A: [37033] complexed with so4; mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d1gcba_: 1gcb A: [37034] complexed with gol, hg, so4 has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2dzya1: 2dzy A:1-453 [163769] Other proteins in same PDB: d2dzya2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2dzza1: 2dzz A:1-453 [163770] Other proteins in same PDB: d2dzza2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2e00a1: 2e00 A:1-453 [163771] Other proteins in same PDB: d2e00a2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2e01a1: 2e01 A:1-453 [163772] Other proteins in same PDB: d2e01a2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2e02a1: 2e02 A:1-453 [163773] Other proteins in same PDB: d2e02a2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d2e03a1: 2e03 A:1-453 [163774] Other proteins in same PDB: d2e03a2 automated match to d1a6ra_ mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
| Domain d3gcba_: 3gcb A: [37032] complexed with gol, so4; mutant has additional subdomain(s) that are not in the common domain has additional insertions and/or extensions that are not grouped together |
Timeline for Species Baker's yeast (Saccharomyces cerevisiae), Gal6 [TaxId:4932] from d.3.1.1 Bleomycin hydrolase: