Class d: Alpha and beta proteins (a+b) [53931] (376 folds) |
Fold d.3: Cysteine proteinases [54000] (1 superfamily) consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn |
Superfamily d.3.1: Cysteine proteinases [54001] (22 families) the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet |
Family d.3.1.1: Papain-like [54002] (25 proteins) |
Protein Papain [54005] (1 species) |
Species Papaya (Carica papaya) [TaxId:3649] [54006] (18 PDB entries) |
Domain d1bp4a_: 1bp4 A: [37011] complexed with ald |
Domain d1bqia_: 1bqi A: [37014] complexed with sba |
Domain d1cvza_: 1cvz A: [37005] complexed with c48 |
Domain d1khpa_: 1khp A: [90963] complexed with glm |
Domain d1khqa_: 1khq A: [90964] complexed with glm |
Domain d1pada_: 1pad A: [37016] |
Domain d1pe6a_: 1pe6 A: [37010] complexed with e6c, moh |
Domain d1pipa_: 1pip A: [37007] complexed with nit, sin |
Domain d1popa_: 1pop A: [37013] complexed with moh |
Domain d1ppda_: 1ppd A: [37008] complexed with seo |
Domain d1ppna_: 1ppn A: [37004] complexed with moh, o o |
Domain d1pppa_: 1ppp A: [37009] complexed with e6c, moh |
Domain d1stfe_: 1stf E: [37012] Other proteins in same PDB: d1stfi_ complexed with cbm; mutant |
Domain d2pada_: 2pad A: [37015] |
Domain d4pada_: 4pad A: [37018] complexed with tos |
Domain d5pada_: 5pad A: [37017] complexed with bzo, glm |
Domain d6pada_: 6pad A: [37019] complexed with bzo |
Domain d9papa_: 9pap A: [37006] complexed with cyo, moh |
Timeline for Species Papaya (Carica papaya) [TaxId:3649] from d.3.1.1 Papain: