Class d: Alpha and beta proteins (a+b) [53931] (381 folds) |
Fold d.3: Cysteine proteinases [54000] (1 superfamily) consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn |
Superfamily d.3.1: Cysteine proteinases [54001] (23 families) the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet |
Family d.3.1.1: Papain-like [54002] (26 proteins) |
Protein Papain [54005] (1 species) |
Papaya (Carica papaya) [TaxId:3649] [54006] (23 PDB entries) |
Domain d1bp4a_: 1bp4 A: [37011] complexed with ald |
Domain d1bqia_: 1bqi A: [37014] complexed with sba |
Domain d1cvza_: 1cvz A: [37005] complexed with c48 |
Domain d1khpa_: 1khp A: [90963] |
Domain d1khqa_: 1khq A: [90964] |
Domain d1pada_: 1pad A: [37016] |
Domain d1pe6a_: 1pe6 A: [37010] complexed with e6c, moh |
Domain d1pipa_: 1pip A: [37007] |
Domain d1popa_: 1pop A: [37013] complexed with moh |
Domain d1ppda_: 1ppd A: [37008] complexed with bme |
Domain d1ppna_: 1ppn A: [37004] complexed with moh, o |
Domain d1pppa_: 1ppp A: [37009] complexed with e6c, moh |
Domain d1stfe_: 1stf E: [37012] Other proteins in same PDB: d1stfi_ |
Domain d2cioa_: 2cio A: [163416] Other proteins in same PDB: d2ciob_ automated match to d1khpa_ complexed with act, gol |
Domain d2pada_: 2pad A: [37015] complexed with cys |
Domain d3e1zb_: 3e1z B: [174538] Other proteins in same PDB: d3e1za_ automated match to d1khpa_ complexed with acy, fmt, zn |
Domain d3imaa_: 3ima A: [178396] Other proteins in same PDB: d3imab_, d3imad_ automated match to d1khpa_ complexed with act |
Domain d3imac_: 3ima C: [178398] Other proteins in same PDB: d3imab_, d3imad_ automated match to d1khpa_ complexed with act |
Domain d3lfya_: 3lfy A: [180263] automated match to d1khpa_ complexed with asn, gly, ser |
Domain d3lfyc_: 3lfy C: [180264] automated match to d1khpa_ complexed with asn, gly, ser |
Domain d4kp9a_: 4kp9 A: [256886] automated match to d1cvza_ complexed with act, bu1, cl, na, so4, yxx, yxz |
Domain d4kp9b_: 4kp9 B: [256889] automated match to d1cvza_ complexed with act, bu1, cl, na, so4, yxx, yxz |
Domain d4pada_: 4pad A: [37018] complexed with tck |
Domain d5pada_: 5pad A: [37017] |
Domain d6pada_: 6pad A: [37019] complexed with 0pc |
Domain d9papa_: 9pap A: [37006] complexed with moh |
Timeline for Protein Papain from d.3.1.1: Papain-like: