Lineage for Protein: Lysozyme

  1. Root: SCOPe 2.03
  2. 1396887Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 1397247Fold d.2: Lysozyme-like [53954] (1 superfamily)
    common alpha+beta motif for the active site region
  4. 1397248Superfamily d.2.1: Lysozyme-like [53955] (12 families) (S)
  5. 1397278Family d.2.1.2: C-type lysozyme [53960] (3 proteins)
    automatically mapped to Pfam PF00062
  6. 1397338Protein Lysozyme [53961] (14 species)
    ubiquitous in a variety of tissues and secretions

Species:

  1. 1397339Australian echidna (Tachyglossus aculeatus) [TaxId:9261] [53972] (1 PDB entry)
  2. 1397341Bobwhite quail (Colinus virginianus) [TaxId:9014] [53966] (3 PDB entries)
    1. Domain for 1bql:
    2. Domain for 1dkj:
    3. Domains for 1dkk:
      1. 1397342Domain d1dkka_: 1dkk A: [36404]
        complexed with no3
      2. 1397343Domain d1dkkb_: 1dkk B: [36405]
        complexed with no3
  3. 1397346Chicken (Gallus gallus) [TaxId:9031] [53962] (457 PDB entries)
    Uniprot P00698
    1. Domains for 4gla:
      1. 1397836Domain d4glaa_: 4gla A: [221983]
        automated match to d3lzta_
      2. 1397837Domain d4glab_: 4gla B: [221984]
        automated match to d3lzta_
    2. Domains for 4glv:
      1. 1397807Domain d4glva_: 4glv A: [221993]
        automated match to d3lzta_
        complexed with epe, gol, po4, so4
      2. 1397808Domain d4glvc_: 4glv C: [221994]
        automated match to d3lzta_
        complexed with epe, gol, po4, so4
      3. 1397809Domain d4glve_: 4glv E: [221995]
        automated match to d3lzta_
        complexed with epe, gol, po4, so4
      4. 1397810Domain d4glvg_: 4glv G: [221996]
        automated match to d3lzta_
        complexed with epe, gol, po4, so4
    3. Domains for 4gn3:
      1. 1397684Domain d4gn3a_: 4gn3 A: [222020]
        automated match to d3lzta_
        complexed with epe, gol
      2. 1397685Domain d4gn3c_: 4gn3 C: [222021]
        automated match to d3lzta_
        complexed with epe, gol
      3. 1397686Domain d4gn3e_: 4gn3 E: [222022]
        automated match to d3lzta_
        complexed with epe, gol
      4. 1397687Domain d4gn3g_: 4gn3 G: [222023]
        automated match to d3lzta_
        complexed with epe, gol
      5. 1397688Domain d4gn3i_: 4gn3 I: [222024]
        automated match to d3lzta_
        complexed with epe, gol
      6. 1397689Domain d4gn3k_: 4gn3 K: [222025]
        automated match to d3lzta_
        complexed with epe, gol
      7. 1397690Domain d4gn3m_: 4gn3 M: [222026]
        automated match to d3lzta_
        complexed with epe, gol
      8. 1397691Domain d4gn3o_: 4gn3 O: [222027]
        automated match to d3lzta_
        complexed with epe, gol
      9. 1397692Domain d4gn3q_: 4gn3 Q: [222028]
        automated match to d3lzta_
        complexed with epe, gol
    4. Domain for 4gn4:
    5. Domains for 4gn5:
      1. 1397600Domain d4gn5c_: 4gn5 C: [222030]
        automated match to d3lzta_
        complexed with act, epe, gol
      2. 1397601Domain d4gn5d_: 4gn5 D: [222031]
        automated match to d3lzta_
        complexed with act, epe, gol
    6. Domain for 4h1p:
    7. Domain for 4h8x:
    8. Domain for 4h8y:
    9. Domain for 4h8z:
    10. Domain for 4h90:
    11. Domain for 4h91:
    12. Domain for 4h92:
    13. Domain for 4h93:
    14. Domain for 4h94:
    15. Domain for 4h9a:
    16. Domain for 4h9b:
    17. Domain for 4h9c:
    18. Domain for 4h9e:
    19. Domain for 4h9f:
    20. Domain for 4h9h:
    21. Domain for 4h9i:
    22. Domain for 4hp0:
    23. Domain for 4hpi:
    24. Domain for 4hsf:
    25. Domain for 4htk:
    26. Domain for 4htn:
    27. Domain for 4htq:
    28. Domain for 4hv1:
    29. Domain for 4hv2:
    30. Domain for 4i8s:
    31. Domain for 4ias:
    32. Domain for 4iat:
    33. Domain for 4ii8:
    34. Domain for 4j1a:
    35. Domain for 4j1b:
    36. Domain for 4j7v:
    37. Domain for 4lfp:
    38. Domain for 4lfx:
    39. Domain for 4lgk:
    40. Domain for 4lym:
    41. Domain for 4lyo:
    42. Domains for 4lyt:
      1. 1397735Domain d4lyta_: 4lyt A: [36277]
      2. 1397736Domain d4lytb_: 4lyt B: [36278]
    43. Domain for 4lyz:
    44. Domain for 4lzt:
    45. Domain for 4m4o:
    46. Domain for 4n5r:
    47. Domain for 4n8z:
    48. Domain for 4ny5:
    49. Domain for 4p2e:
    50. Domains for 5lym:
      1. 1397642Domain d5lyma_: 5lym A: [36268]
        complexed with no3
      2. 1397643Domain d5lymb_: 5lym B: [36269]
        complexed with no3
    51. Domain for 5lyt:
    52. Domain for 5lyz:
    53. Domain for 6lyt:
    54. Domain for 6lyz:
    55. Domain for 7lyz:
    56. Domain for 8lyz:
    57. Domain for 9lyz:
  4. 1397870Dog (Canis familiaris), milk [TaxId:9615] [53971] (4 PDB entries)
    1. Domains for 1el1:
      1. 1397872Domain d1el1a_: 1el1 A: [59451]
        holo-form
        complexed with ca
      2. 1397873Domain d1el1b_: 1el1 B: [59452]
        holo-form
        complexed with ca
    2. Domain for 1i56:
    3. Domain for 1qqy:
    4. Domains for 2cwi:
      1. 1397874Domain d2cwia_: 2cwi A: [130922]
        automated match to d1el1a_
        complexed with so4
      2. 1397875Domain d2cwib_: 2cwi B: [130923]
        automated match to d1el1a_
        complexed with so4
  5. 1397877Guinea fowl (Numida meleagris) [TaxId:8996] [53964] (2 PDB entries)
    1. Domains for 1fbi:
      1. 1397879Domain d1fbix_: 1fbi X: [36399]
        Other proteins in same PDB: d1fbih1, d1fbih2, d1fbil1, d1fbil2, d1fbip1, d1fbip2, d1fbiq1, d1fbiq2
      2. 1397880Domain d1fbiy_: 1fbi Y: [36400]
        Other proteins in same PDB: d1fbih1, d1fbih2, d1fbil1, d1fbil2, d1fbip1, d1fbip2, d1fbiq1, d1fbiq2
    2. Domain for 1hhl:
  6. 1397881Horse (Equus caballus), milk [TaxId:9796] [53970] (1 PDB entry)
  7. 1397883Human (Homo sapiens) [TaxId:9606] [53969] (200 PDB entries)
    Uniprot P00695
    1. Domain for 133l:
    2. Domain for 134l:
    3. Domain for 1b5u:
    4. Domain for 1b5v:
    5. Domain for 1b5w:
    6. Domain for 1b5x:
    7. Domain for 1b5y:
    8. Domains for 1b5z:
      1. 1398077Domain d1b5za_: 1b5z A: [36567]
        mutant
      2. 1398078Domain d1b5zb_: 1b5z B: [36568]
        mutant
    9. Domain for 1b7l:
    10. Domain for 1b7m:
    11. Domain for 1b7n:
    12. Domain for 1b7o:
    13. Domain for 1b7p:
    14. Domain for 1b7q:
    15. Domain for 1b7r:
    16. Domain for 1b7s:
    17. Domains for 1bb3:
      1. 1398048Domain d1bb3a_: 1bb3 A: [36544]
        mutant
      2. 1398049Domain d1bb3b_: 1bb3 B: [36545]
        mutant
    18. Domains for 1bb4:
      1. 1398098Domain d1bb4a_: 1bb4 A: [36583]
        mutant
      2. 1398099Domain d1bb4b_: 1bb4 B: [36584]
        mutant
    19. Domains for 1bb5:
      1. 1398061Domain d1bb5a_: 1bb5 A: [36553]
        complexed with cto; mutant
      2. 1398062Domain d1bb5b_: 1bb5 B: [36554]
        complexed with cto; mutant
    20. Domain for 1c43:
    21. Domain for 1c45:
    22. Domain for 1c46:
    23. Domain for 1c7p:
    24. Domain for 1cj6:
    25. Domain for 1cj7:
    26. Domain for 1cj8:
    27. Domain for 1cj9:
    28. Domain for 1ckc:
    29. Domain for 1ckd:
    30. Domain for 1ckf:
    31. Domains for 1ckg:
      1. 1398085Domain d1ckga_: 1ckg A: [36574]
        mutant
      2. 1398086Domain d1ckgb_: 1ckg B: [36575]
        mutant
    32. Domain for 1ckh:
    33. Domain for 1d6p:
    34. Domain for 1d6q:
    35. Domain for 1di3:
    36. Domain for 1di4:
    37. Domain for 1di5:
    38. Domain for 1eq4:
    39. Domain for 1eq5:
    40. Domain for 1eqe:
    41. Domain for 1gay:
    42. Domain for 1gaz:
    43. Domain for 1gb0:
    44. Domain for 1gb2:
    45. Domain for 1gb3:
    46. Domain for 1gb5:
    47. Domain for 1gb6:
    48. Domain for 1gb7:
    49. Domain for 1gb8:
    50. Domain for 1gb9:
    51. Domain for 1gbo:
    52. Domain for 1gbw:
    53. Domain for 1gbx:
    54. Domain for 1gby:
    55. Domain for 1gbz:
    56. Domain for 1gdw:
    57. Domain for 1gdx:
    58. Domain for 1ge0:
    59. Domain for 1ge1:
    60. Domain for 1ge2:
    61. Domain for 1ge3:
    62. Domain for 1ge4:
    63. Domain for 1gev:
    64. Domain for 1gez:
    65. Domain for 1gf0:
    66. Domain for 1gf3:
    67. Domain for 1gf4:
    68. Domain for 1gf5:
    69. Domain for 1gf6:
    70. Domain for 1gf7:
    71. Domain for 1gf8:
    72. Domain for 1gf9:
    73. Domain for 1gfa:
    74. Domain for 1gfe:
    75. Domain for 1gfg:
    76. Domain for 1gfh:
    77. Domain for 1gfj:
    78. Domain for 1gfk:
    79. Domain for 1gfr:
    80. Domain for 1gft:
    81. Domain for 1gfu:
    82. Domain for 1gfv:
    83. Domain for 1hnl:
    84. Domain for 1i1z:
    85. Domain for 1i20:
    86. Domains for 1i22:
      1. 1398037Domain d1i22a_: 1i22 A: [36559]
        complexed with ca; mutant
      2. 1398038Domain d1i22b_: 1i22 B: [36560]
        complexed with ca; mutant
      3. 1398039Domain d1i22c_: 1i22 C: [36561]
        complexed with ca; mutant
      4. 1398040Domain d1i22d_: 1i22 D: [36562]
        complexed with ca; mutant
    87. Domain for 1inu:
    88. Domain for 1ioc:
    89. Domain for 1ip1:
    90. Domain for 1ip2:
    91. Domains for 1ip3:
      1. 1397970Domain d1ip3a_: 1ip3 A: [66248]
        complexed with na, so4
      2. 1397971Domain d1ip3b_: 1ip3 B: [66249]
        complexed with na, so4
    92. Domain for 1ip4:
    93. Domain for 1ip5:
    94. Domain for 1ip6:
    95. Domains for 1ip7:
      1. 1398053Domain d1ip7a_: 1ip7 A: [66253]
        complexed with na
      2. 1398054Domain d1ip7b_: 1ip7 B: [66254]
        complexed with na
    96. Domain for 1iwt:
    97. Domain for 1iwu:
    98. Domain for 1iwv:
    99. Domain for 1iww:
    100. Domain for 1iwx:
    101. Domain for 1iwy:
    102. Domain for 1iwz:
    103. Domain for 1ix0:
    104. Domain for 1iy3:
    105. Domain for 1iy4:
    106. Domain for 1jka:
    107. Domain for 1jkb:
    108. Domain for 1jkc:
    109. Domain for 1jkd:
    110. Domain for 1jsf:
    111. Domain for 1jwr:
    112. Domain for 1laa:
    113. Domain for 1lhh:
    114. Domain for 1lhi:
    115. Domain for 1lhj:
    116. Domain for 1lhk:
    117. Domain for 1lhl:
    118. Domain for 1lhm:
    119. Domain for 1lmt:
    120. Domain for 1loz:
    121. Domain for 1lyy:
    122. Domain for 1lz1:
    123. Domain for 1lz4:
    124. Domain for 1lz5:
    125. Domain for 1lz6:
    126. Domain for 1lzr:
    127. Domains for 1lzs:
      1. 1397896Domain d1lzsa_: 1lzs A: [36412]
        complexed with na
      2. 1397897Domain d1lzsb_: 1lzs B: [36413]
        complexed with na
    128. Domain for 1op9:
    129. Domain for 1oua:
    130. Domain for 1oub:
    131. Domain for 1ouc:
    132. Domain for 1oud:
    133. Domain for 1oue:
    134. Domain for 1ouf:
    135. Domain for 1oug:
    136. Domain for 1ouh:
    137. Domain for 1oui:
    138. Domain for 1ouj:
    139. Domains for 1qsw:
      1. 1398056Domain d1qswa_: 1qsw A: [63330]
        mutant
      2. 1398057Domain d1qswb_: 1qsw B: [63331]
        mutant
      3. 1398058Domain d1qswc_: 1qsw C: [63332]
        mutant
      4. 1398059Domain d1qswd_: 1qsw D: [63333]
        mutant
    140. Domain for 1re2:
    141. Domain for 1rem:
    142. Domain for 1rex:
    143. Domain for 1rey:
    144. Domain for 1rez:
    145. Domain for 1tay:
    146. Domain for 1tby:
    147. Domain for 1tcy:
    148. Domain for 1tdy:
    149. Domain for 1ubz:
    150. Domain for 1w08:
    151. Domain for 1wqm:
    152. Domain for 1wqn:
    153. Domain for 1wqo:
    154. Domain for 1wqp:
    155. Domain for 1wqq:
    156. Domain for 1wqr:
    157. Domain for 1yam:
    158. Domain for 1yan:
    159. Domain for 1yao:
    160. Domain for 1yap:
    161. Domain for 1yaq:
    162. Domain for 207l:
    163. Domain for 208l:
    164. Domain for 2bqa:
    165. Domain for 2bqb:
    166. Domain for 2bqc:
    167. Domain for 2bqd:
    168. Domain for 2bqe:
    169. Domain for 2bqf:
    170. Domain for 2bqg:
    171. Domain for 2bqh:
    172. Domain for 2bqi:
    173. Domain for 2bqj:
    174. Domain for 2bqk:
    175. Domain for 2bql:
    176. Domain for 2bqm:
    177. Domain for 2bqn:
    178. Domain for 2bqo:
    179. Domain for 2hea:
    180. Domain for 2heb:
    181. Domain for 2hec:
    182. Domain for 2hed:
    183. Domain for 2hee:
    184. Domain for 2hef:
    185. Domain for 2lhm:
    186. Domains for 2mea:
      1. 1398083Domain d2meaa_: 2mea A: [36572]
        mutant
      2. 1398084Domain d2meab_: 2mea B: [36573]
        mutant
    187. Domain for 2meb:
    188. Domains for 2mec:
      1. 1398092Domain d2meca_: 2mec A: [36576]
        mutant
      2. 1398093Domain d2mecb_: 2mec B: [36577]
        mutant
    189. Domain for 2med:
    190. Domain for 2mee:
    191. Domain for 2mef:
    192. Domain for 2meg:
    193. Domain for 2meh:
    194. Domain for 2mei:
    195. Domain for 2nwd:
    196. Domain for 2zij:
    197. Domain for 2zik:
    198. Domain for 3lhm:
    199. Domains for 3ln2:
      1. 1398064Domain d3ln2a_: 3ln2 A: [180404]
        automated match to d133la_
      2. 1398065Domain d3ln2b_: 3ln2 B: [180405]
        automated match to d133la_
    200. Domains for 4i0c:
      1. 1398087Domain d4i0ca_: 4i0c A: [228189]
        Other proteins in same PDB: d4i0cc_, d4i0cd_
        automated match to d1jsfa_
        complexed with cl, gol
      2. 1398088Domain d4i0cb_: 4i0c B: [228188]
        Other proteins in same PDB: d4i0cc_, d4i0cd_
        automated match to d1jsfa_
        complexed with cl, gol
  8. 1398102Japanese quail (Coturnix coturnix japonica) [TaxId:93934] [53967] (1 PDB entry)
  9. 1398104Mouse (Mus musculus) [TaxId:10090] [75329] (1 PDB entry)
  10. 1398106Pheasant (Phasianus colchicus) [TaxId:9054] [53965] (2 PDB entries)
    1. Domains for 1ghl:
      1. 1398107Domain d1ghla_: 1ghl A: [36401]
      2. 1398108Domain d1ghlb_: 1ghl B: [36402]
    2. Domain for 1jhl:
  11. 1398110Rainbow trout (Oncorhynchus mykiss) [TaxId:8022] [53973] (7 PDB entries)
    1. Domain for 1bb6:
    2. Domain for 1bb7:
    3. Domain for 1lmc:
    4. Domain for 1lmn:
    5. Domain for 1lmo:
    6. Domain for 1lmp:
    7. Domain for 1lmq:
  12. 1398118Silkworm (Bombyx mori) [TaxId:7091] [64201] (1 PDB entry)
  13. 1398120Tasar silkworm (Antheraea mylitta) [TaxId:34739] [69627] (1 PDB entry)
    induced antibacterial protein
  14. 1398122Turkey (Meleagris gallopavo) [TaxId:9103] [53963] (13 PDB entries)
    1. Domain for 135l:
    2. Domains for 1dzb:
      1. 1398132Domain d1dzbx_: 1dzb X: [36393]
        Other proteins in same PDB: d1dzba1, d1dzba2, d1dzbb1, d1dzbb2
      2. 1398133Domain d1dzby_: 1dzb Y: [36394]
        Other proteins in same PDB: d1dzba1, d1dzba2, d1dzbb1, d1dzbb2
    3. Domain for 1jef:
    4. Domain for 1jse:
    5. Domains for 1jtp:
      1. 1398130Domain d1jtpl_: 1jtp L: [67280]
        Other proteins in same PDB: d1jtpa_, d1jtpb_
        complexed with fmt, na
      2. 1398131Domain d1jtpm_: 1jtp M: [67281]
        Other proteins in same PDB: d1jtpa_, d1jtpb_
        complexed with fmt, na
    6. Domain for 1ljn:
    7. Domain for 1lz2:
    8. Domain for 1lzy:
    9. Domain for 1tew:
    10. Domain for 1uac:
    11. Domain for 1xft:
    12. Domain for 2lz2:
    13. Domain for 3lz2:

More pages of results:

More info for Protein Lysozyme from d.2.1.2: C-type lysozyme

Timeline for Protein Lysozyme from d.2.1.2: C-type lysozyme: