Lineage for Species: Bacillus amyloliquefaciens [TaxId: 1390]

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2170736Fold d.1: Microbial ribonucleases [53932] (1 superfamily)
    single helix packs against antiparallel beta-sheet
  4. 2170737Superfamily d.1.1: Microbial ribonucleases [53933] (4 families) (S)
  5. 2170738Family d.1.1.2: Bacterial ribonucleases [81307] (6 proteins)
  6. 2170739Protein Barnase [81305] (1 species)
  7. 2170740Species Bacillus amyloliquefaciens [TaxId:1390] [53945] (49 PDB entries)

PDB entries in Species: Bacillus amyloliquefaciens [TaxId: 1390]:

  1. Domain(s) for 1a2p:
    1. 2170743Domain d1a2pa_: 1a2p A: [36140]
      complexed with zn
    2. 2170744Domain d1a2pb_: 1a2p B: [36141]
      complexed with zn
    3. 2170745Domain d1a2pc_: 1a2p C: [36142]
      complexed with zn
  2. Domain(s) for 1b20:
    1. 2170748Domain d1b20a_: 1b20 A: [36207]
      complexed with zn
    2. 2170749Domain d1b20b_: 1b20 B: [36208]
      complexed with zn
    3. 2170750Domain d1b20c_: 1b20 C: [36209]
      complexed with zn
  3. Domain(s) for 1b21:
    1. 2170816Domain d1b21a_: 1b21 A: [36219]
      complexed with zn
    2. 2170817Domain d1b21b_: 1b21 B: [36220]
      complexed with zn
    3. 2170818Domain d1b21c_: 1b21 C: [36221]
      complexed with zn
  4. Domain(s) for 1b27:
    1. 2170829Domain d1b27a_: 1b27 A: [36223]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    2. 2170830Domain d1b27b_: 1b27 B: [36224]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    3. 2170831Domain d1b27c_: 1b27 C: [36225]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
  5. Domain(s) for 1b2s:
    1. 2170756Domain d1b2sa_: 1b2s A: [36213]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    2. 2170757Domain d1b2sb_: 1b2s B: [36214]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    3. 2170758Domain d1b2sc_: 1b2s C: [36215]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
  6. Domain(s) for 1b2u:
    1. 2170845Domain d1b2ua_: 1b2u A: [36226]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    2. 2170846Domain d1b2ub_: 1b2u B: [36227]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    3. 2170847Domain d1b2uc_: 1b2u C: [36228]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
  7. Domain(s) for 1b2x:
    1. 2170751Domain d1b2xa_: 1b2x A: [36210]
      complexed with zn
    2. 2170752Domain d1b2xb_: 1b2x B: [36211]
      complexed with zn
    3. 2170753Domain d1b2xc_: 1b2x C: [36212]
      complexed with zn
  8. Domain(s) for 1b2z:
    1. 2170795Domain d1b2za_: 1b2z A: [36216]
      complexed with zn
    2. 2170796Domain d1b2zb_: 1b2z B: [36217]
      complexed with zn
    3. 2170797Domain d1b2zc_: 1b2z C: [36218]
      complexed with zn
  9. Domain(s) for 1b3s:
    1. 2170860Domain d1b3sa_: 1b3s A: [36229]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    2. 2170861Domain d1b3sb_: 1b3s B: [36230]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    3. 2170862Domain d1b3sc_: 1b3s C: [36231]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
  10. Domain(s) for 1ban:
    1. 2170842Domain d1bana_: 1ban A: [36197]
      mutant
    2. 2170843Domain d1banb_: 1ban B: [36198]
      mutant
    3. 2170844Domain d1banc_: 1ban C: [36199]
      mutant
  11. Domain(s) for 1bao:
    1. 2170826Domain d1baoa_: 1bao A: [36187]
      complexed with zn; mutant
    2. 2170827Domain d1baob_: 1bao B: [36188]
      complexed with zn; mutant
    3. 2170828Domain d1baoc_: 1bao C: [36189]
      complexed with zn; mutant
  12. Domain(s) for 1bgs:
    1. 2170857Domain d1bgsa_: 1bgs A: [36203]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    2. 2170858Domain d1bgsb_: 1bgs B: [36204]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    3. 2170859Domain d1bgsc_: 1bgs C: [36205]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
  13. Domain(s) for 1bne:
    1. 2170822Domain d1bnea_: 1bne A: [36181]
      mutant
    2. 2170823Domain d1bneb_: 1bne B: [36182]
      mutant
    3. 2170824Domain d1bnec_: 1bne C: [36183]
      mutant
  14. Domain(s) for 1bnf:
    1. 2170792Domain d1bnfa_: 1bnf A: [36166]
      mutant
    2. 2170793Domain d1bnfb_: 1bnf B: [36167]
      mutant
    3. 2170794Domain d1bnfc_: 1bnf C: [36168]
      mutant
  15. Domain(s) for 1bng:
    1. 2170819Domain d1bnga_: 1bng A: [36184]
      mutant
    2. 2170820Domain d1bngb_: 1bng B: [36185]
      mutant
    3. 2170821Domain d1bngc_: 1bng C: [36186]
      mutant
  16. Domain(s) for 1bni:
    1. 2170838Domain d1bnia_: 1bni A: [36193]
    2. 2170839Domain d1bnib_: 1bni B: [36194]
    3. 2170840Domain d1bnic_: 1bni C: [36195]
  17. Domain(s) for 1bnj:
    1. 2170807Domain d1bnja_: 1bnj A: [36172]
    2. 2170808Domain d1bnjb_: 1bnj B: [36173]
    3. 2170809Domain d1bnjc_: 1bnj C: [36174]
  18. Domain(s) for 1bnr:
  19. Domain(s) for 1bns:
    1. 2170813Domain d1bnsa_: 1bns A: [36178]
      mutant
    2. 2170814Domain d1bnsb_: 1bns B: [36179]
      mutant
    3. 2170815Domain d1bnsc_: 1bns C: [36180]
      mutant
  20. Domain(s) for 1brg:
    1. 2170832Domain d1brga_: 1brg A: [36190]
      complexed with zn
    2. 2170833Domain d1brgb_: 1brg B: [36191]
      complexed with zn
    3. 2170834Domain d1brgc_: 1brg C: [36192]
      complexed with zn
  21. Domain(s) for 1brh:
    1. 2170771Domain d1brha_: 1brh A: [36151]
      complexed with zn; mutant
    2. 2170772Domain d1brhb_: 1brh B: [36152]
      complexed with zn; mutant
    3. 2170773Domain d1brhc_: 1brh C: [36153]
      complexed with zn; mutant
  22. Domain(s) for 1bri:
    1. 2170762Domain d1bria_: 1bri A: [36145]
      mutant
    2. 2170763Domain d1brib_: 1bri B: [36146]
      mutant
    3. 2170764Domain d1bric_: 1bri C: [36147]
      mutant
  23. Domain(s) for 1brj:
    1. 2170789Domain d1brja_: 1brj A: [36160]
      complexed with zn; mutant
    2. 2170790Domain d1brjb_: 1brj B: [36161]
      complexed with zn; mutant
    3. 2170791Domain d1brjc_: 1brj C: [36162]
      complexed with zn; mutant
  24. Domain(s) for 1brk:
    1. 2170768Domain d1brka_: 1brk A: [36148]
      complexed with zn; mutant
    2. 2170769Domain d1brkb_: 1brk B: [36149]
      complexed with zn; mutant
    3. 2170770Domain d1brkc_: 1brk C: [36150]
      complexed with zn; mutant
  25. Domain(s) for 1brn:
    1. 2170754Domain d1brnl_: 1brn L: [36143]
      protein/DNA complex; protein/RNA complex
    2. 2170755Domain d1brnm_: 1brn M: [36144]
      protein/DNA complex; protein/RNA complex
  26. Domain(s) for 1brs:
    1. 2170786Domain d1brsa_: 1brs A: [36163]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    2. 2170787Domain d1brsb_: 1brs B: [36164]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    3. 2170788Domain d1brsc_: 1brs C: [36165]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
  27. Domain(s) for 1bsa:
    1. 2170801Domain d1bsaa_: 1bsa A: [36169]
      mutant
    2. 2170802Domain d1bsab_: 1bsa B: [36170]
      mutant
    3. 2170803Domain d1bsac_: 1bsa C: [36171]
      mutant
  28. Domain(s) for 1bsb:
    1. 2170783Domain d1bsba_: 1bsb A: [36157]
      mutant
    2. 2170784Domain d1bsbb_: 1bsb B: [36158]
      mutant
    3. 2170785Domain d1bsbc_: 1bsb C: [36159]
      mutant
  29. Domain(s) for 1bsc:
    1. 2170780Domain d1bsca_: 1bsc A: [36154]
      mutant
    2. 2170781Domain d1bscb_: 1bsc B: [36155]
      mutant
    3. 2170782Domain d1bscc_: 1bsc C: [36156]
      mutant
  30. Domain(s) for 1bsd:
    1. 2170851Domain d1bsda_: 1bsd A: [36200]
      mutant
    2. 2170852Domain d1bsdb_: 1bsd B: [36201]
      mutant
    3. 2170853Domain d1bsdc_: 1bsd C: [36202]
      mutant
  31. Domain(s) for 1bse:
    1. 2170810Domain d1bsea_: 1bse A: [36175]
      mutant
    2. 2170811Domain d1bseb_: 1bse B: [36176]
      mutant
    3. 2170812Domain d1bsec_: 1bse C: [36177]
      mutant
  32. Domain(s) for 1fw7:
  33. Domain(s) for 1rnb:
  34. Domain(s) for 1x1u:
    1. 2170854Domain d1x1ua_: 1x1u A: [121598]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    2. 2170855Domain d1x1ub_: 1x1u B: [121599]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    3. 2170856Domain d1x1uc_: 1x1u C: [121600]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
  35. Domain(s) for 1x1w:
    1. 2170835Domain d1x1wa_: 1x1w A: [121604]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    2. 2170836Domain d1x1wb_: 1x1w B: [121605]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    3. 2170837Domain d1x1wc_: 1x1w C: [121606]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
  36. Domain(s) for 1x1x:
    1. 2170848Domain d1x1xa_: 1x1x A: [121607]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    2. 2170849Domain d1x1xb_: 1x1x B: [121608]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    3. 2170850Domain d1x1xc_: 1x1x C: [121609]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
  37. Domain(s) for 1x1y:
    1. 2170774Domain d1x1ya_: 1x1y A: [121610]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    2. 2170775Domain d1x1yb_: 1x1y B: [121611]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    3. 2170776Domain d1x1yc_: 1x1y C: [121612]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
  38. Domain(s) for 1yvs:
    • 2170825Domain d1yvsa_: 1yvs A: [36222]
      trimeric domain swapped form
      complexed with so4
  39. Domain(s) for 2c4b:
    1. 2170741Domain d2c4ba1: 2c4b A:3-110 [129801]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
    2. 2170742Domain d2c4bb1: 2c4b B:3-110 [129803]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
  40. Domain(s) for 2f4y:
    1. 2170798Domain d2f4ya_: 2f4y A: [132960]
      automated match to d1b27a_
      complexed with zn
    2. 2170799Domain d2f4yb_: 2f4y B: [132961]
      automated match to d1b27a_
      complexed with zn
    3. 2170800Domain d2f4yc_: 2f4y C: [132962]
      automated match to d1b27a_
      complexed with zn
  41. Domain(s) for 2f56:
    1. 2170765Domain d2f56a_: 2f56 A: [132974]
      automated match to d1b27a_
      complexed with ure, zn
    2. 2170766Domain d2f56b_: 2f56 B: [132975]
      automated match to d1b27a_
      complexed with ure, zn
    3. 2170767Domain d2f56c_: 2f56 C: [132976]
      automated match to d1b27a_
      complexed with ure, zn
  42. Domain(s) for 2f5m:
    1. 2170777Domain d2f5ma_: 2f5m A: [133001]
      automated match to d1b27a_
      complexed with brj
    2. 2170778Domain d2f5mb_: 2f5m B: [133002]
      automated match to d1b27a_
      complexed with brj
    3. 2170779Domain d2f5mc_: 2f5m C: [133003]
      automated match to d1b27a_
      complexed with brj
  43. Domain(s) for 2f5w:
    1. 2170804Domain d2f5wa_: 2f5w A: [133012]
      automated match to d1b27a_
      complexed with tou, zn
    2. 2170805Domain d2f5wb_: 2f5w B: [133013]
      automated match to d1b27a_
      complexed with tou, zn
    3. 2170806Domain d2f5wc_: 2f5w C: [133014]
      automated match to d1b27a_
      complexed with tou, zn
  44. Domain(s) for 2kf3:
  45. Domain(s) for 2kf4:
  46. Domain(s) for 2kf5:
  47. Domain(s) for 2kf6:
  48. Domain(s) for 2za4:
    1. 2170746Domain d2za4a_: 2za4 A: [171121]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
    2. 2170747Domain d2za4c_: 2za4 C: [171123]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
  49. Domain(s) for 3kch:
    1. 2170759Domain d3kcha_: 3kch A: [179268]
      automated match to d1b27a_
      complexed with ptd
    2. 2170760Domain d3kchb_: 3kch B: [179269]
      automated match to d1b27a_
      complexed with ptd
    3. 2170761Domain d3kchc_: 3kch C: [179270]
      automated match to d1b27a_
      complexed with ptd

More info for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase

Timeline for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase: