Lineage for Species: Bacillus amyloliquefaciens [TaxId: 1390]

  1. Root: SCOP 1.75
  2. 849709Class d: Alpha and beta proteins (a+b) [53931] (376 folds)
  3. 849710Fold d.1: Microbial ribonucleases [53932] (1 superfamily)
    single helix packs against antiparallel beta-sheet
  4. 849711Superfamily d.1.1: Microbial ribonucleases [53933] (3 families) (S)
  5. 849712Family d.1.1.2: Bacterial ribonucleases [81307] (5 proteins)
  6. 849713Protein Barnase [81305] (1 species)
  7. 849714Species Bacillus amyloliquefaciens [TaxId:1390] [53945] (43 PDB entries)

PDB entries in Species: Bacillus amyloliquefaciens [TaxId: 1390]:

  1. Domain(s) for 1a2p:
    1. 849717Domain d1a2pa_: 1a2p A: [36140]
    2. 849718Domain d1a2pb_: 1a2p B: [36141]
    3. 849719Domain d1a2pc_: 1a2p C: [36142]
      complexed with zn
  2. Domain(s) for 1b20:
    1. 849720Domain d1b20a_: 1b20 A: [36207]
    2. 849721Domain d1b20b_: 1b20 B: [36208]
    3. 849722Domain d1b20c_: 1b20 C: [36209]
      complexed with zn
  3. Domain(s) for 1b21:
    1. 849758Domain d1b21a_: 1b21 A: [36219]
    2. 849759Domain d1b21b_: 1b21 B: [36220]
    3. 849760Domain d1b21c_: 1b21 C: [36221]
      complexed with zn
  4. Domain(s) for 1b27:
    1. 849795Domain d1b27a_: 1b27 A: [36223]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
    2. 849796Domain d1b27b_: 1b27 B: [36224]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
    3. 849797Domain d1b27c_: 1b27 C: [36225]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      mutant
  5. Domain(s) for 1b2s:
    1. 849726Domain d1b2sa_: 1b2s A: [36213]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
    2. 849727Domain d1b2sb_: 1b2s B: [36214]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
    3. 849728Domain d1b2sc_: 1b2s C: [36215]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      complexed with sul; mutant
  6. Domain(s) for 1b2u:
    1. 849804Domain d1b2ua_: 1b2u A: [36226]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
    2. 849805Domain d1b2ub_: 1b2u B: [36227]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
    3. 849806Domain d1b2uc_: 1b2u C: [36228]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      mutant
  7. Domain(s) for 1b2x:
    1. 849723Domain d1b2xa_: 1b2x A: [36210]
    2. 849724Domain d1b2xb_: 1b2x B: [36211]
    3. 849725Domain d1b2xc_: 1b2x C: [36212]
      complexed with zn
  8. Domain(s) for 1b2z:
    1. 849743Domain d1b2za_: 1b2z A: [36216]
    2. 849744Domain d1b2zb_: 1b2z B: [36217]
    3. 849745Domain d1b2zc_: 1b2z C: [36218]
      complexed with zn
  9. Domain(s) for 1b3s:
    1. 849826Domain d1b3sa_: 1b3s A: [36229]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
    2. 849827Domain d1b3sb_: 1b3s B: [36230]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
    3. 849828Domain d1b3sc_: 1b3s C: [36231]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      mutant
  10. Domain(s) for 1ban:
    1. 849820Domain d1bana_: 1ban A: [36197]
    2. 849821Domain d1banb_: 1ban B: [36198]
    3. 849822Domain d1banc_: 1ban C: [36199]
      mutant
  11. Domain(s) for 1bao:
    1. 849798Domain d1baoa_: 1bao A: [36187]
    2. 849799Domain d1baob_: 1bao B: [36188]
    3. 849800Domain d1baoc_: 1bao C: [36189]
      complexed with zn; mutant
  12. Domain(s) for 1bgs:
    1. 849829Domain d1bgsa_: 1bgs A: [36203]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    2. 849830Domain d1bgsb_: 1bgs B: [36204]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    3. 849831Domain d1bgsc_: 1bgs C: [36205]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
      mutant
  13. Domain(s) for 1bne:
    1. 849786Domain d1bnea_: 1bne A: [36181]
    2. 849787Domain d1bneb_: 1bne B: [36182]
    3. 849788Domain d1bnec_: 1bne C: [36183]
      mutant
  14. Domain(s) for 1bnf:
    1. 849749Domain d1bnfa_: 1bnf A: [36166]
    2. 849750Domain d1bnfb_: 1bnf B: [36167]
    3. 849751Domain d1bnfc_: 1bnf C: [36168]
      mutant
  15. Domain(s) for 1bng:
    1. 849761Domain d1bnga_: 1bng A: [36184]
    2. 849762Domain d1bngb_: 1bng B: [36185]
    3. 849763Domain d1bngc_: 1bng C: [36186]
      mutant
  16. Domain(s) for 1bni:
    1. 849810Domain d1bnia_: 1bni A: [36193]
    2. 849811Domain d1bnib_: 1bni B: [36194]
    3. 849812Domain d1bnic_: 1bni C: [36195]
  17. Domain(s) for 1bnj:
    1. 849764Domain d1bnja_: 1bnj A: [36172]
    2. 849765Domain d1bnjb_: 1bnj B: [36173]
    3. 849766Domain d1bnjc_: 1bnj C: [36174]
  18. Domain(s) for 1bnr:
  19. Domain(s) for 1bns:
    1. 849789Domain d1bnsa_: 1bns A: [36178]
    2. 849790Domain d1bnsb_: 1bns B: [36179]
    3. 849791Domain d1bnsc_: 1bns C: [36180]
      mutant
  20. Domain(s) for 1brg:
    1. 849813Domain d1brga_: 1brg A: [36190]
    2. 849814Domain d1brgb_: 1brg B: [36191]
    3. 849815Domain d1brgc_: 1brg C: [36192]
      complexed with zn; mutant
  21. Domain(s) for 1brh:
    1. 849746Domain d1brha_: 1brh A: [36151]
    2. 849747Domain d1brhb_: 1brh B: [36152]
    3. 849748Domain d1brhc_: 1brh C: [36153]
      complexed with zn; mutant
  22. Domain(s) for 1bri:
    1. 849737Domain d1bria_: 1bri A: [36145]
    2. 849738Domain d1brib_: 1bri B: [36146]
    3. 849739Domain d1bric_: 1bri C: [36147]
      mutant
  23. Domain(s) for 1brj:
    1. 849767Domain d1brja_: 1brj A: [36160]
    2. 849768Domain d1brjb_: 1brj B: [36161]
    3. 849769Domain d1brjc_: 1brj C: [36162]
      complexed with zn; mutant
  24. Domain(s) for 1brk:
    1. 849740Domain d1brka_: 1brk A: [36148]
    2. 849741Domain d1brkb_: 1brk B: [36149]
    3. 849742Domain d1brkc_: 1brk C: [36150]
      complexed with zn; mutant
  25. Domain(s) for 1brn:
    1. 849729Domain d1brnl_: 1brn L: [36143]
    2. 849730Domain d1brnm_: 1brn M: [36144]
  26. Domain(s) for 1brs:
    1. 849770Domain d1brsa_: 1brs A: [36163]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    2. 849771Domain d1brsb_: 1brs B: [36164]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    3. 849772Domain d1brsc_: 1brs C: [36165]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
      mutant
  27. Domain(s) for 1bsa:
    1. 849782Domain d1bsaa_: 1bsa A: [36169]
    2. 849783Domain d1bsab_: 1bsa B: [36170]
    3. 849784Domain d1bsac_: 1bsa C: [36171]
      mutant
  28. Domain(s) for 1bsb:
    1. 849773Domain d1bsba_: 1bsb A: [36157]
    2. 849774Domain d1bsbb_: 1bsb B: [36158]
    3. 849775Domain d1bsbc_: 1bsb C: [36159]
      mutant
  29. Domain(s) for 1bsc:
    1. 849752Domain d1bsca_: 1bsc A: [36154]
    2. 849753Domain d1bscb_: 1bsc B: [36155]
    3. 849754Domain d1bscc_: 1bsc C: [36156]
      mutant
  30. Domain(s) for 1bsd:
    1. 849823Domain d1bsda_: 1bsd A: [36200]
    2. 849824Domain d1bsdb_: 1bsd B: [36201]
    3. 849825Domain d1bsdc_: 1bsd C: [36202]
      mutant
  31. Domain(s) for 1bse:
    1. 849801Domain d1bsea_: 1bse A: [36175]
    2. 849802Domain d1bseb_: 1bse B: [36176]
    3. 849803Domain d1bsec_: 1bse C: [36177]
      mutant
  32. Domain(s) for 1fw7:
  33. Domain(s) for 1rnb:
  34. Domain(s) for 1x1u:
    1. 849817Domain d1x1ua1: 1x1u A:1-110 [121598]
      Other proteins in same PDB: d1x1ud1, d1x1ue1, d1x1uf1
      automatically matched to d1b27a_
      mutant
    2. 849818Domain d1x1ub1: 1x1u B:1-110 [121599]
      Other proteins in same PDB: d1x1ud1, d1x1ue1, d1x1uf1
      automatically matched to d1b27a_
      mutant
    3. 849819Domain d1x1uc1: 1x1u C:2-110 [121600]
      Other proteins in same PDB: d1x1ud1, d1x1ue1, d1x1uf1
      automatically matched to d1b27a_
      mutant
  35. Domain(s) for 1x1w:
    1. 849792Domain d1x1wa1: 1x1w A:3-110 [121604]
      Other proteins in same PDB: d1x1wd1, d1x1we1, d1x1wf1
      automatically matched to d1b27a_
      mutant
    2. 849793Domain d1x1wb1: 1x1w B:1-110 [121605]
      Other proteins in same PDB: d1x1wd1, d1x1we1, d1x1wf1
      automatically matched to d1b27a_
      mutant
    3. 849794Domain d1x1wc1: 1x1w C:2-110 [121606]
      Other proteins in same PDB: d1x1wd1, d1x1we1, d1x1wf1
      automatically matched to d1b27a_
      mutant
  36. Domain(s) for 1x1x:
    1. 849807Domain d1x1xa1: 1x1x A:1-110 [121607]
      Other proteins in same PDB: d1x1xd1, d1x1xe1, d1x1xf1
      automatically matched to d1b27a_
      mutant
    2. 849808Domain d1x1xb1: 1x1x B:1-110 [121608]
      Other proteins in same PDB: d1x1xd1, d1x1xe1, d1x1xf1
      automatically matched to d1b27a_
      mutant
    3. 849809Domain d1x1xc1: 1x1x C:2-110 [121609]
      Other proteins in same PDB: d1x1xd1, d1x1xe1, d1x1xf1
      automatically matched to d1b27a_
      mutant
  37. Domain(s) for 1x1y:
    1. 849731Domain d1x1ya1: 1x1y A:3-110 [121610]
      Other proteins in same PDB: d1x1yd1, d1x1ye1, d1x1yf1
      automatically matched to d1b27a_
      mutant
    2. 849732Domain d1x1yb1: 1x1y B:3-110 [121611]
      Other proteins in same PDB: d1x1yd1, d1x1ye1, d1x1yf1
      automatically matched to d1b27a_
      mutant
    3. 849733Domain d1x1yc1: 1x1y C:3-110 [121612]
      Other proteins in same PDB: d1x1yd1, d1x1ye1, d1x1yf1
      automatically matched to d1b27a_
      mutant
  38. Domain(s) for 1yvs:
    • 849785Domain d1yvsa_: 1yvs A: [36222]
      trimeric domain swapped form
      complexed with so4
  39. Domain(s) for 2c4b:
    1. 849715Domain d2c4ba1: 2c4b A:3-110 [129801]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
    2. 849716Domain d2c4bb1: 2c4b B:3-110 [129803]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
  40. Domain(s) for 2f4y:
    1. 849776Domain d2f4ya1: 2f4y A:1-108 [132960]
      automatically matched to d1b27a_
      complexed with zn
    2. 849777Domain d2f4yb1: 2f4y B:1-108 [132961]
      automatically matched to d1b27a_
      complexed with zn
    3. 849778Domain d2f4yc1: 2f4y C:1-108 [132962]
      automatically matched to d1b27a_
      complexed with zn
  41. Domain(s) for 2f56:
    1. 849734Domain d2f56a1: 2f56 A:1-108 [132974]
      automatically matched to d1b27a_
      complexed with ure, zn
    2. 849735Domain d2f56b1: 2f56 B:1-108 [132975]
      automatically matched to d1b27a_
      complexed with ure, zn
    3. 849736Domain d2f56c1: 2f56 C:1-108 [132976]
      automatically matched to d1b27a_
      complexed with ure, zn
  42. Domain(s) for 2f5m:
    1. 849755Domain d2f5ma1: 2f5m A:1-108 [133001]
      automatically matched to d1b27a_
      complexed with brj
    2. 849756Domain d2f5mb1: 2f5m B:1-108 [133002]
      automatically matched to d1b27a_
      complexed with brj
    3. 849757Domain d2f5mc1: 2f5m C:1-108 [133003]
      automatically matched to d1b27a_
      complexed with brj
  43. Domain(s) for 2f5w:
    1. 849779Domain d2f5wa1: 2f5w A:1-108 [133012]
      automatically matched to d1b27a_
      complexed with tou, zn
    2. 849780Domain d2f5wb1: 2f5w B:1-108 [133013]
      automatically matched to d1b27a_
      complexed with tou, zn
    3. 849781Domain d2f5wc1: 2f5w C:1-108 [133014]
      automatically matched to d1b27a_
      complexed with tou, zn

More info for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase

Timeline for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase: