Lineage for Species: Bacillus amyloliquefaciens [TaxId: 1390]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2152204Fold d.1: Microbial ribonucleases [53932] (1 superfamily)
    single helix packs against antiparallel beta-sheet
  4. 2152205Superfamily d.1.1: Microbial ribonucleases [53933] (4 families) (S)
  5. 2152206Family d.1.1.2: Bacterial ribonucleases [81307] (6 protein domains)
  6. 2152207Protein Barnase [81305] (1 species)
  7. 2152208Species Bacillus amyloliquefaciens [TaxId:1390] [53945] (49 PDB entries)

PDB entries in Species: Bacillus amyloliquefaciens [TaxId: 1390]:

  1. Domain(s) for 1a2p:
    1. 2152211Domain d1a2pa_: 1a2p A: [36140]
      complexed with zn
    2. 2152212Domain d1a2pb_: 1a2p B: [36141]
      complexed with zn
    3. 2152213Domain d1a2pc_: 1a2p C: [36142]
      complexed with zn
  2. Domain(s) for 1b20:
    1. 2152216Domain d1b20a_: 1b20 A: [36207]
      complexed with zn
    2. 2152217Domain d1b20b_: 1b20 B: [36208]
      complexed with zn
    3. 2152218Domain d1b20c_: 1b20 C: [36209]
      complexed with zn
  3. Domain(s) for 1b21:
    1. 2152284Domain d1b21a_: 1b21 A: [36219]
      complexed with zn
    2. 2152285Domain d1b21b_: 1b21 B: [36220]
      complexed with zn
    3. 2152286Domain d1b21c_: 1b21 C: [36221]
      complexed with zn
  4. Domain(s) for 1b27:
    1. 2152297Domain d1b27a_: 1b27 A: [36223]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    2. 2152298Domain d1b27b_: 1b27 B: [36224]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    3. 2152299Domain d1b27c_: 1b27 C: [36225]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
  5. Domain(s) for 1b2s:
    1. 2152224Domain d1b2sa_: 1b2s A: [36213]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    2. 2152225Domain d1b2sb_: 1b2s B: [36214]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    3. 2152226Domain d1b2sc_: 1b2s C: [36215]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
  6. Domain(s) for 1b2u:
    1. 2152313Domain d1b2ua_: 1b2u A: [36226]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    2. 2152314Domain d1b2ub_: 1b2u B: [36227]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    3. 2152315Domain d1b2uc_: 1b2u C: [36228]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
  7. Domain(s) for 1b2x:
    1. 2152219Domain d1b2xa_: 1b2x A: [36210]
      complexed with zn
    2. 2152220Domain d1b2xb_: 1b2x B: [36211]
      complexed with zn
    3. 2152221Domain d1b2xc_: 1b2x C: [36212]
      complexed with zn
  8. Domain(s) for 1b2z:
    1. 2152263Domain d1b2za_: 1b2z A: [36216]
      complexed with zn
    2. 2152264Domain d1b2zb_: 1b2z B: [36217]
      complexed with zn
    3. 2152265Domain d1b2zc_: 1b2z C: [36218]
      complexed with zn
  9. Domain(s) for 1b3s:
    1. 2152328Domain d1b3sa_: 1b3s A: [36229]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    2. 2152329Domain d1b3sb_: 1b3s B: [36230]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    3. 2152330Domain d1b3sc_: 1b3s C: [36231]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
  10. Domain(s) for 1ban:
    1. 2152310Domain d1bana_: 1ban A: [36197]
      mutant
    2. 2152311Domain d1banb_: 1ban B: [36198]
      mutant
    3. 2152312Domain d1banc_: 1ban C: [36199]
      mutant
  11. Domain(s) for 1bao:
    1. 2152294Domain d1baoa_: 1bao A: [36187]
      complexed with zn; mutant
    2. 2152295Domain d1baob_: 1bao B: [36188]
      complexed with zn; mutant
    3. 2152296Domain d1baoc_: 1bao C: [36189]
      complexed with zn; mutant
  12. Domain(s) for 1bgs:
    1. 2152325Domain d1bgsa_: 1bgs A: [36203]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    2. 2152326Domain d1bgsb_: 1bgs B: [36204]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    3. 2152327Domain d1bgsc_: 1bgs C: [36205]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
  13. Domain(s) for 1bne:
    1. 2152290Domain d1bnea_: 1bne A: [36181]
      mutant
    2. 2152291Domain d1bneb_: 1bne B: [36182]
      mutant
    3. 2152292Domain d1bnec_: 1bne C: [36183]
      mutant
  14. Domain(s) for 1bnf:
    1. 2152260Domain d1bnfa_: 1bnf A: [36166]
      mutant
    2. 2152261Domain d1bnfb_: 1bnf B: [36167]
      mutant
    3. 2152262Domain d1bnfc_: 1bnf C: [36168]
      mutant
  15. Domain(s) for 1bng:
    1. 2152287Domain d1bnga_: 1bng A: [36184]
      mutant
    2. 2152288Domain d1bngb_: 1bng B: [36185]
      mutant
    3. 2152289Domain d1bngc_: 1bng C: [36186]
      mutant
  16. Domain(s) for 1bni:
    1. 2152306Domain d1bnia_: 1bni A: [36193]
    2. 2152307Domain d1bnib_: 1bni B: [36194]
    3. 2152308Domain d1bnic_: 1bni C: [36195]
  17. Domain(s) for 1bnj:
    1. 2152275Domain d1bnja_: 1bnj A: [36172]
    2. 2152276Domain d1bnjb_: 1bnj B: [36173]
    3. 2152277Domain d1bnjc_: 1bnj C: [36174]
  18. Domain(s) for 1bnr:
  19. Domain(s) for 1bns:
    1. 2152281Domain d1bnsa_: 1bns A: [36178]
      mutant
    2. 2152282Domain d1bnsb_: 1bns B: [36179]
      mutant
    3. 2152283Domain d1bnsc_: 1bns C: [36180]
      mutant
  20. Domain(s) for 1brg:
    1. 2152300Domain d1brga_: 1brg A: [36190]
      complexed with zn
    2. 2152301Domain d1brgb_: 1brg B: [36191]
      complexed with zn
    3. 2152302Domain d1brgc_: 1brg C: [36192]
      complexed with zn
  21. Domain(s) for 1brh:
    1. 2152239Domain d1brha_: 1brh A: [36151]
      complexed with zn; mutant
    2. 2152240Domain d1brhb_: 1brh B: [36152]
      complexed with zn; mutant
    3. 2152241Domain d1brhc_: 1brh C: [36153]
      complexed with zn; mutant
  22. Domain(s) for 1bri:
    1. 2152230Domain d1bria_: 1bri A: [36145]
      mutant
    2. 2152231Domain d1brib_: 1bri B: [36146]
      mutant
    3. 2152232Domain d1bric_: 1bri C: [36147]
      mutant
  23. Domain(s) for 1brj:
    1. 2152257Domain d1brja_: 1brj A: [36160]
      complexed with zn; mutant
    2. 2152258Domain d1brjb_: 1brj B: [36161]
      complexed with zn; mutant
    3. 2152259Domain d1brjc_: 1brj C: [36162]
      complexed with zn; mutant
  24. Domain(s) for 1brk:
    1. 2152236Domain d1brka_: 1brk A: [36148]
      complexed with zn; mutant
    2. 2152237Domain d1brkb_: 1brk B: [36149]
      complexed with zn; mutant
    3. 2152238Domain d1brkc_: 1brk C: [36150]
      complexed with zn; mutant
  25. Domain(s) for 1brn:
    1. 2152222Domain d1brnl_: 1brn L: [36143]
      protein/DNA complex; protein/RNA complex
    2. 2152223Domain d1brnm_: 1brn M: [36144]
      protein/DNA complex; protein/RNA complex
  26. Domain(s) for 1brs:
    1. 2152254Domain d1brsa_: 1brs A: [36163]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    2. 2152255Domain d1brsb_: 1brs B: [36164]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    3. 2152256Domain d1brsc_: 1brs C: [36165]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
  27. Domain(s) for 1bsa:
    1. 2152269Domain d1bsaa_: 1bsa A: [36169]
      mutant
    2. 2152270Domain d1bsab_: 1bsa B: [36170]
      mutant
    3. 2152271Domain d1bsac_: 1bsa C: [36171]
      mutant
  28. Domain(s) for 1bsb:
    1. 2152251Domain d1bsba_: 1bsb A: [36157]
      mutant
    2. 2152252Domain d1bsbb_: 1bsb B: [36158]
      mutant
    3. 2152253Domain d1bsbc_: 1bsb C: [36159]
      mutant
  29. Domain(s) for 1bsc:
    1. 2152248Domain d1bsca_: 1bsc A: [36154]
      mutant
    2. 2152249Domain d1bscb_: 1bsc B: [36155]
      mutant
    3. 2152250Domain d1bscc_: 1bsc C: [36156]
      mutant
  30. Domain(s) for 1bsd:
    1. 2152319Domain d1bsda_: 1bsd A: [36200]
      mutant
    2. 2152320Domain d1bsdb_: 1bsd B: [36201]
      mutant
    3. 2152321Domain d1bsdc_: 1bsd C: [36202]
      mutant
  31. Domain(s) for 1bse:
    1. 2152278Domain d1bsea_: 1bse A: [36175]
      mutant
    2. 2152279Domain d1bseb_: 1bse B: [36176]
      mutant
    3. 2152280Domain d1bsec_: 1bse C: [36177]
      mutant
  32. Domain(s) for 1fw7:
  33. Domain(s) for 1rnb:
  34. Domain(s) for 1x1u:
    1. 2152322Domain d1x1ua_: 1x1u A: [121598]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    2. 2152323Domain d1x1ub_: 1x1u B: [121599]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    3. 2152324Domain d1x1uc_: 1x1u C: [121600]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
  35. Domain(s) for 1x1w:
    1. 2152303Domain d1x1wa_: 1x1w A: [121604]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    2. 2152304Domain d1x1wb_: 1x1w B: [121605]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    3. 2152305Domain d1x1wc_: 1x1w C: [121606]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
  36. Domain(s) for 1x1x:
    1. 2152316Domain d1x1xa_: 1x1x A: [121607]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    2. 2152317Domain d1x1xb_: 1x1x B: [121608]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    3. 2152318Domain d1x1xc_: 1x1x C: [121609]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
  37. Domain(s) for 1x1y:
    1. 2152242Domain d1x1ya_: 1x1y A: [121610]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    2. 2152243Domain d1x1yb_: 1x1y B: [121611]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    3. 2152244Domain d1x1yc_: 1x1y C: [121612]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
  38. Domain(s) for 1yvs:
    • 2152293Domain d1yvsa_: 1yvs A: [36222]
      trimeric domain swapped form
      complexed with so4
  39. Domain(s) for 2c4b:
    1. 2152209Domain d2c4ba1: 2c4b A:3-110 [129801]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
    2. 2152210Domain d2c4bb1: 2c4b B:3-110 [129803]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
  40. Domain(s) for 2f4y:
    1. 2152266Domain d2f4ya_: 2f4y A: [132960]
      automated match to d1b27a_
      complexed with zn
    2. 2152267Domain d2f4yb_: 2f4y B: [132961]
      automated match to d1b27a_
      complexed with zn
    3. 2152268Domain d2f4yc_: 2f4y C: [132962]
      automated match to d1b27a_
      complexed with zn
  41. Domain(s) for 2f56:
    1. 2152233Domain d2f56a_: 2f56 A: [132974]
      automated match to d1b27a_
      complexed with ure, zn
    2. 2152234Domain d2f56b_: 2f56 B: [132975]
      automated match to d1b27a_
      complexed with ure, zn
    3. 2152235Domain d2f56c_: 2f56 C: [132976]
      automated match to d1b27a_
      complexed with ure, zn
  42. Domain(s) for 2f5m:
    1. 2152245Domain d2f5ma_: 2f5m A: [133001]
      automated match to d1b27a_
      complexed with brj
    2. 2152246Domain d2f5mb_: 2f5m B: [133002]
      automated match to d1b27a_
      complexed with brj
    3. 2152247Domain d2f5mc_: 2f5m C: [133003]
      automated match to d1b27a_
      complexed with brj
  43. Domain(s) for 2f5w:
    1. 2152272Domain d2f5wa_: 2f5w A: [133012]
      automated match to d1b27a_
      complexed with tou, zn
    2. 2152273Domain d2f5wb_: 2f5w B: [133013]
      automated match to d1b27a_
      complexed with tou, zn
    3. 2152274Domain d2f5wc_: 2f5w C: [133014]
      automated match to d1b27a_
      complexed with tou, zn
  44. Domain(s) for 2kf3:
  45. Domain(s) for 2kf4:
  46. Domain(s) for 2kf5:
  47. Domain(s) for 2kf6:
  48. Domain(s) for 2za4:
    1. 2152214Domain d2za4a_: 2za4 A: [171121]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
    2. 2152215Domain d2za4c_: 2za4 C: [171123]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
  49. Domain(s) for 3kch:
    1. 2152227Domain d3kcha_: 3kch A: [179268]
      automated match to d1b27a_
      complexed with ptd
    2. 2152228Domain d3kchb_: 3kch B: [179269]
      automated match to d1b27a_
      complexed with ptd
    3. 2152229Domain d3kchc_: 3kch C: [179270]
      automated match to d1b27a_
      complexed with ptd

More info for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase

Timeline for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase: