Lineage for Species: Bacillus amyloliquefaciens [TaxId: 1390]

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2494618Fold d.1: Microbial ribonucleases [53932] (1 superfamily)
    single helix packs against antiparallel beta-sheet
  4. 2494619Superfamily d.1.1: Microbial ribonucleases [53933] (4 families) (S)
  5. 2494620Family d.1.1.2: Bacterial ribonucleases [81307] (6 protein domains)
  6. 2494621Protein Barnase [81305] (1 species)
  7. 2494622Species Bacillus amyloliquefaciens [TaxId:1390] [53945] (49 PDB entries)

PDB entries in Species: Bacillus amyloliquefaciens [TaxId: 1390]:

  1. Domain(s) for 1a2p:
    1. 2494623Domain d1a2pa_: 1a2p A: [36140]
      complexed with zn
    2. 2494624Domain d1a2pb_: 1a2p B: [36141]
      complexed with zn
    3. 2494625Domain d1a2pc_: 1a2p C: [36142]
      complexed with zn
  2. Domain(s) for 1b20:
    1. 2494670Domain d1b20a_: 1b20 A: [36207]
      complexed with zn
    2. 2494671Domain d1b20b_: 1b20 B: [36208]
      complexed with zn
    3. 2494672Domain d1b20c_: 1b20 C: [36209]
      complexed with zn
  3. Domain(s) for 1b21:
    1. 2494703Domain d1b21a_: 1b21 A: [36219]
      complexed with zn
    2. 2494704Domain d1b21b_: 1b21 B: [36220]
      complexed with zn
    3. 2494705Domain d1b21c_: 1b21 C: [36221]
      complexed with zn
  4. Domain(s) for 1b27:
    1. 2494667Domain d1b27a_: 1b27 A: [36223]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    2. 2494668Domain d1b27b_: 1b27 B: [36224]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
    3. 2494669Domain d1b27c_: 1b27 C: [36225]
      Other proteins in same PDB: d1b27d_, d1b27e_, d1b27f_
      protein/RNA complex; mutant
  5. Domain(s) for 1b2s:
    1. 2494630Domain d1b2sa_: 1b2s A: [36213]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    2. 2494631Domain d1b2sb_: 1b2s B: [36214]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
    3. 2494632Domain d1b2sc_: 1b2s C: [36215]
      Other proteins in same PDB: d1b2sd_, d1b2se_, d1b2sf_
      protein/RNA complex; complexed with so4; mutant
  6. Domain(s) for 1b2u:
    1. 2494680Domain d1b2ua_: 1b2u A: [36226]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    2. 2494681Domain d1b2ub_: 1b2u B: [36227]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
    3. 2494682Domain d1b2uc_: 1b2u C: [36228]
      Other proteins in same PDB: d1b2ud_, d1b2ue_, d1b2uf_
      protein/RNA complex; mutant
  7. Domain(s) for 1b2x:
    1. 2494691Domain d1b2xa_: 1b2x A: [36210]
      complexed with zn
    2. 2494692Domain d1b2xb_: 1b2x B: [36211]
      complexed with zn
    3. 2494693Domain d1b2xc_: 1b2x C: [36212]
      complexed with zn
  8. Domain(s) for 1b2z:
    1. 2494718Domain d1b2za_: 1b2z A: [36216]
      complexed with zn
    2. 2494719Domain d1b2zb_: 1b2z B: [36217]
      complexed with zn
    3. 2494720Domain d1b2zc_: 1b2z C: [36218]
      complexed with zn
  9. Domain(s) for 1b3s:
    1. 2494727Domain d1b3sa_: 1b3s A: [36229]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    2. 2494728Domain d1b3sb_: 1b3s B: [36230]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
    3. 2494729Domain d1b3sc_: 1b3s C: [36231]
      Other proteins in same PDB: d1b3sd_, d1b3se_, d1b3sf_
      protein/RNA complex; mutant
  10. Domain(s) for 1ban:
    1. 2494739Domain d1bana_: 1ban A: [36197]
      mutant
    2. 2494740Domain d1banb_: 1ban B: [36198]
      mutant
    3. 2494741Domain d1banc_: 1ban C: [36199]
      mutant
  11. Domain(s) for 1bao:
    1. 2494733Domain d1baoa_: 1bao A: [36187]
      complexed with zn; mutant
    2. 2494734Domain d1baob_: 1bao B: [36188]
      complexed with zn; mutant
    3. 2494735Domain d1baoc_: 1bao C: [36189]
      complexed with zn; mutant
  12. Domain(s) for 1bgs:
    1. 2494700Domain d1bgsa_: 1bgs A: [36203]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    2. 2494701Domain d1bgsb_: 1bgs B: [36204]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
    3. 2494702Domain d1bgsc_: 1bgs C: [36205]
      Other proteins in same PDB: d1bgse_, d1bgsf_, d1bgsg_
  13. Domain(s) for 1bne:
    1. 2494663Domain d1bnea_: 1bne A: [36181]
      mutant
    2. 2494664Domain d1bneb_: 1bne B: [36182]
      mutant
    3. 2494665Domain d1bnec_: 1bne C: [36183]
      mutant
  14. Domain(s) for 1bnf:
    1. 2494654Domain d1bnfa_: 1bnf A: [36166]
      mutant
    2. 2494655Domain d1bnfb_: 1bnf B: [36167]
      mutant
    3. 2494656Domain d1bnfc_: 1bnf C: [36168]
      mutant
  15. Domain(s) for 1bng:
    1. 2494660Domain d1bnga_: 1bng A: [36184]
      mutant
    2. 2494661Domain d1bngb_: 1bng B: [36185]
      mutant
    3. 2494662Domain d1bngc_: 1bng C: [36186]
      mutant
  16. Domain(s) for 1bni:
    1. 2494676Domain d1bnia_: 1bni A: [36193]
    2. 2494677Domain d1bnib_: 1bni B: [36194]
    3. 2494678Domain d1bnic_: 1bni C: [36195]
  17. Domain(s) for 1bnj:
    1. 2494657Domain d1bnja_: 1bnj A: [36172]
    2. 2494658Domain d1bnjb_: 1bnj B: [36173]
    3. 2494659Domain d1bnjc_: 1bnj C: [36174]
  18. Domain(s) for 1bnr:
  19. Domain(s) for 1bns:
    1. 2494724Domain d1bnsa_: 1bns A: [36178]
      mutant
    2. 2494725Domain d1bnsb_: 1bns B: [36179]
      mutant
    3. 2494726Domain d1bnsc_: 1bns C: [36180]
      mutant
  20. Domain(s) for 1brg:
    1. 2494736Domain d1brga_: 1brg A: [36190]
      complexed with zn
    2. 2494737Domain d1brgb_: 1brg B: [36191]
      complexed with zn
    3. 2494738Domain d1brgc_: 1brg C: [36192]
      complexed with zn
  21. Domain(s) for 1brh:
    1. 2494642Domain d1brha_: 1brh A: [36151]
      complexed with zn; mutant
    2. 2494643Domain d1brhb_: 1brh B: [36152]
      complexed with zn; mutant
    3. 2494644Domain d1brhc_: 1brh C: [36153]
      complexed with zn; mutant
  22. Domain(s) for 1bri:
    1. 2494636Domain d1bria_: 1bri A: [36145]
      mutant
    2. 2494637Domain d1brib_: 1bri B: [36146]
      mutant
    3. 2494638Domain d1bric_: 1bri C: [36147]
      mutant
  23. Domain(s) for 1brj:
    1. 2494651Domain d1brja_: 1brj A: [36160]
      complexed with zn; mutant
    2. 2494652Domain d1brjb_: 1brj B: [36161]
      complexed with zn; mutant
    3. 2494653Domain d1brjc_: 1brj C: [36162]
      complexed with zn; mutant
  24. Domain(s) for 1brk:
    1. 2494639Domain d1brka_: 1brk A: [36148]
      complexed with zn; mutant
    2. 2494640Domain d1brkb_: 1brk B: [36149]
      complexed with zn; mutant
    3. 2494641Domain d1brkc_: 1brk C: [36150]
      complexed with zn; mutant
  25. Domain(s) for 1brn:
    1. 2494686Domain d1brnl_: 1brn L: [36143]
      protein/DNA complex; protein/RNA complex
    2. 2494687Domain d1brnm_: 1brn M: [36144]
      protein/DNA complex; protein/RNA complex
  26. Domain(s) for 1brs:
    1. 2494706Domain d1brsa_: 1brs A: [36163]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    2. 2494707Domain d1brsb_: 1brs B: [36164]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
    3. 2494708Domain d1brsc_: 1brs C: [36165]
      Other proteins in same PDB: d1brsd_, d1brse_, d1brsf_
  27. Domain(s) for 1bsa:
    1. 2494715Domain d1bsaa_: 1bsa A: [36169]
      mutant
    2. 2494716Domain d1bsab_: 1bsa B: [36170]
      mutant
    3. 2494717Domain d1bsac_: 1bsa C: [36171]
      mutant
  28. Domain(s) for 1bsb:
    1. 2494712Domain d1bsba_: 1bsb A: [36157]
      mutant
    2. 2494713Domain d1bsbb_: 1bsb B: [36158]
      mutant
    3. 2494714Domain d1bsbc_: 1bsb C: [36159]
      mutant
  29. Domain(s) for 1bsc:
    1. 2494709Domain d1bsca_: 1bsc A: [36154]
      mutant
    2. 2494710Domain d1bscb_: 1bsc B: [36155]
      mutant
    3. 2494711Domain d1bscc_: 1bsc C: [36156]
      mutant
  30. Domain(s) for 1bsd:
    1. 2494742Domain d1bsda_: 1bsd A: [36200]
      mutant
    2. 2494743Domain d1bsdb_: 1bsd B: [36201]
      mutant
    3. 2494744Domain d1bsdc_: 1bsd C: [36202]
      mutant
  31. Domain(s) for 1bse:
    1. 2494721Domain d1bsea_: 1bse A: [36175]
      mutant
    2. 2494722Domain d1bseb_: 1bse B: [36176]
      mutant
    3. 2494723Domain d1bsec_: 1bse C: [36177]
      mutant
  32. Domain(s) for 1fw7:
  33. Domain(s) for 1rnb:
  34. Domain(s) for 1x1u:
    1. 2494688Domain d1x1ua_: 1x1u A: [121598]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    2. 2494689Domain d1x1ub_: 1x1u B: [121599]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
    3. 2494690Domain d1x1uc_: 1x1u C: [121600]
      Other proteins in same PDB: d1x1ud_, d1x1ue_, d1x1uf_
      automated match to d1b27a_
  35. Domain(s) for 1x1w:
    1. 2494673Domain d1x1wa_: 1x1w A: [121604]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    2. 2494674Domain d1x1wb_: 1x1w B: [121605]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
    3. 2494675Domain d1x1wc_: 1x1w C: [121606]
      Other proteins in same PDB: d1x1wd1, d1x1we_, d1x1wf_
      automated match to d1b27a_
  36. Domain(s) for 1x1x:
    1. 2494683Domain d1x1xa_: 1x1x A: [121607]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    2. 2494684Domain d1x1xb_: 1x1x B: [121608]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
    3. 2494685Domain d1x1xc_: 1x1x C: [121609]
      Other proteins in same PDB: d1x1xd1, d1x1xe_, d1x1xf_
      automated match to d1b27a_
  37. Domain(s) for 1x1y:
    1. 2494645Domain d1x1ya_: 1x1y A: [121610]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    2. 2494646Domain d1x1yb_: 1x1y B: [121611]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
    3. 2494647Domain d1x1yc_: 1x1y C: [121612]
      Other proteins in same PDB: d1x1yd1, d1x1ye_, d1x1yf_
      automated match to d1b27a_
  38. Domain(s) for 1yvs:
    • 2494666Domain d1yvsa_: 1yvs A: [36222]
      trimeric domain swapped form
      complexed with so4
  39. Domain(s) for 2c4b:
    1. 2494626Domain d2c4ba1: 2c4b A:3-110 [129801]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
    2. 2494627Domain d2c4bb1: 2c4b B:3-110 [129803]
      Other proteins in same PDB: d2c4ba2, d2c4bb2
      automatically matched to d1b3sa_
      complexed with 2pe, edo, fmt, gol, mes, so4, unx; mutant
  40. Domain(s) for 2f4y:
    1. 2494730Domain d2f4ya_: 2f4y A: [132960]
      automated match to d1b27a_
      complexed with zn
    2. 2494731Domain d2f4yb_: 2f4y B: [132961]
      automated match to d1b27a_
      complexed with zn
    3. 2494732Domain d2f4yc_: 2f4y C: [132962]
      automated match to d1b27a_
      complexed with zn
  41. Domain(s) for 2f56:
    1. 2494694Domain d2f56a_: 2f56 A: [132974]
      automated match to d1b27a_
      complexed with ure, zn
    2. 2494695Domain d2f56b_: 2f56 B: [132975]
      automated match to d1b27a_
      complexed with ure, zn
    3. 2494696Domain d2f56c_: 2f56 C: [132976]
      automated match to d1b27a_
      complexed with ure, zn
  42. Domain(s) for 2f5m:
    1. 2494648Domain d2f5ma_: 2f5m A: [133001]
      automated match to d1b27a_
      complexed with brj
    2. 2494649Domain d2f5mb_: 2f5m B: [133002]
      automated match to d1b27a_
      complexed with brj
    3. 2494650Domain d2f5mc_: 2f5m C: [133003]
      automated match to d1b27a_
      complexed with brj
  43. Domain(s) for 2f5w:
    1. 2494697Domain d2f5wa_: 2f5w A: [133012]
      automated match to d1b27a_
      complexed with tou, zn
    2. 2494698Domain d2f5wb_: 2f5w B: [133013]
      automated match to d1b27a_
      complexed with tou, zn
    3. 2494699Domain d2f5wc_: 2f5w C: [133014]
      automated match to d1b27a_
      complexed with tou, zn
  44. Domain(s) for 2kf3:
  45. Domain(s) for 2kf4:
  46. Domain(s) for 2kf5:
  47. Domain(s) for 2kf6:
  48. Domain(s) for 2za4:
    1. 2494628Domain d2za4a_: 2za4 A: [171121]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
    2. 2494629Domain d2za4c_: 2za4 C: [171123]
      Other proteins in same PDB: d2za4b_, d2za4d_
      automated match to d1b27a_
      complexed with cl
  49. Domain(s) for 3kch:
    1. 2494633Domain d3kcha_: 3kch A: [179268]
      automated match to d1b27a_
      complexed with ptd
    2. 2494634Domain d3kchb_: 3kch B: [179269]
      automated match to d1b27a_
      complexed with ptd
    3. 2494635Domain d3kchc_: 3kch C: [179270]
      automated match to d1b27a_
      complexed with ptd

More info for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase

Timeline for Species Bacillus amyloliquefaciens [TaxId:1390] from d.1.1.2 Barnase: