Lineage for Species: Fungus (Aspergillus oryzae) [TaxId: 5062]

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2152204Fold d.1: Microbial ribonucleases [53932] (1 superfamily)
    single helix packs against antiparallel beta-sheet
  4. 2152205Superfamily d.1.1: Microbial ribonucleases [53933] (4 families) (S)
  5. 2152447Family d.1.1.4: Fungal ribonucleases [81311] (4 protein domains)
  6. 2152458Protein RNase T1 [53939] (2 species)
  7. 2152461Species Fungus (Aspergillus oryzae) [TaxId:5062] [53940] (67 PDB entries)

PDB entries in Species: Fungus (Aspergillus oryzae) [TaxId: 5062]:

  1. Domain(s) for 1b2m:
    1. 2152533Domain d1b2ma_: 1b2m A: [36115]
      protein/RNA complex
    2. 2152534Domain d1b2mb_: 1b2m B: [36116]
      protein/RNA complex
  2. Domain(s) for 1bir:
    1. 2152507Domain d1bira_: 1bir A: [36083]
      complexed with 2gp, ca; mutant
    2. 2152508Domain d1birb_: 1bir B: [36084]
      complexed with 2gp, ca; mutant
  3. Domain(s) for 1bu4:
  4. Domain(s) for 1bvi:
    1. 2152503Domain d1bvia_: 1bvi A: [36090]
      complexed with 2gp, ca
    2. 2152504Domain d1bvib_: 1bvi B: [36091]
      complexed with 2gp, ca
    3. 2152505Domain d1bvic_: 1bvi C: [36092]
      complexed with 2gp, ca
    4. 2152506Domain d1bvid_: 1bvi D: [36093]
      complexed with 2gp, ca
  5. Domain(s) for 1ch0:
    1. 2152552Domain d1ch0a_: 1ch0 A: [36129]
      complexed with 2gp, ca, cl
    2. 2152553Domain d1ch0b_: 1ch0 B: [36130]
      complexed with 2gp, ca, cl
    3. 2152554Domain d1ch0c_: 1ch0 C: [36131]
      complexed with 2gp, ca, cl
  6. Domain(s) for 1det:
  7. Domain(s) for 1fys:
  8. Domain(s) for 1fzu:
  9. Domain(s) for 1g02:
  10. Domain(s) for 1gsp:
  11. Domain(s) for 1hyf:
  12. Domain(s) for 1i0v:
  13. Domain(s) for 1i0x:
    1. 2152469Domain d1i0xa_: 1i0x A: [36059]
      complexed with 2gp, ca
    2. 2152470Domain d1i0xb_: 1i0x B: [36060]
      complexed with 2gp, ca
    3. 2152471Domain d1i0xc_: 1i0x C: [36061]
      complexed with 2gp, ca
    4. 2152472Domain d1i0xd_: 1i0x D: [36062]
      complexed with 2gp, ca
  14. Domain(s) for 1i2e:
  15. Domain(s) for 1i2f:
  16. Domain(s) for 1i2g:
  17. Domain(s) for 1i3f:
  18. Domain(s) for 1i3i:
  19. Domain(s) for 1iyy:
  20. Domain(s) for 1lov:
  21. Domain(s) for 1low:
  22. Domain(s) for 1loy:
  23. Domain(s) for 1lra:
  24. Domain(s) for 1q9e:
    1. 2152484Domain d1q9ea_: 1q9e A: [96269]
      complexed with trs
    2. 2152485Domain d1q9eb_: 1q9e B: [96270]
      complexed with trs
    3. 2152486Domain d1q9ec_: 1q9e C: [96271]
      complexed with trs
  25. Domain(s) for 1rga:
    • 2152467Domain d1rgaa_: 1rga A: [36056]
      protein/RNA complex; complexed with 3gp, ca, g
  26. Domain(s) for 1rgc:
    1. 2152529Domain d1rgca_: 1rgc A: [36102]
      complexed with 3gp, ca
    2. 2152530Domain d1rgcb_: 1rgc B: [36103]
      complexed with 3gp, ca
  27. Domain(s) for 1rgk:
  28. Domain(s) for 1rgl:
  29. Domain(s) for 1rhl:
  30. Domain(s) for 1rls:
  31. Domain(s) for 1rn1:
    1. 2152478Domain d1rn1a_: 1rn1 A: [36122]
      complexed with so4
    2. 2152479Domain d1rn1b_: 1rn1 B: [36123]
      complexed with so4
    3. 2152480Domain d1rn1c_: 1rn1 C: [36124]
      complexed with so4
  32. Domain(s) for 1rn4:
  33. Domain(s) for 1rnt:
  34. Domain(s) for 1trp:
    1. 2152557Domain d1trpa_: 1trp A: [36134]
      complexed with 2gp, ca; mutant
    2. 2152558Domain d1trpb_: 1trp B: [36135]
      complexed with 2gp, ca; mutant
  35. Domain(s) for 1trq:
    1. 2152550Domain d1trqa_: 1trq A: [36127]
      complexed with 2gp, ca; mutant
    2. 2152551Domain d1trqb_: 1trq B: [36128]
      complexed with 2gp, ca; mutant
  36. Domain(s) for 1tto:
    1. 2152543Domain d1ttoa_: 1tto A: [161783]
      automated match to d1q9ea_
      complexed with trs
    2. 2152544Domain d1ttob_: 1tto B: [161784]
      automated match to d1q9ea_
      complexed with trs
    3. 2152545Domain d1ttoc_: 1tto C: [161785]
      automated match to d1q9ea_
      complexed with trs
  37. Domain(s) for 1ygw:
  38. Domain(s) for 2aad:
    1. 2152525Domain d2aada_: 2aad A: [36110]
      complexed with 2gp, ca; mutant
    2. 2152526Domain d2aadb_: 2aad B: [36111]
      complexed with 2gp, ca; mutant
  39. Domain(s) for 2aae:
  40. Domain(s) for 2bir:
  41. Domain(s) for 2bu4:
  42. Domain(s) for 2gsp:
  43. Domain(s) for 2hoh:
    1. 2152497Domain d2hoha_: 2hoh A: [36077]
      complexed with 2gp, ca, na, po4; mutant
    2. 2152498Domain d2hohb_: 2hoh B: [36078]
      complexed with 2gp, ca, na, po4; mutant
    3. 2152499Domain d2hohc_: 2hoh C: [36079]
      complexed with 2gp, ca, na, po4; mutant
    4. 2152500Domain d2hohd_: 2hoh D: [36080]
      complexed with 2gp, ca, na, po4; mutant
  44. Domain(s) for 2rnt:
  45. Domain(s) for 3bir:
  46. Domain(s) for 3bu4:
  47. Domain(s) for 3gsp:
  48. Domain(s) for 3hoh:
    1. 2152509Domain d3hoha_: 3hoh A: [36085]
      complexed with 2gp, ca; mutant
    2. 2152510Domain d3hohb_: 3hoh B: [36086]
      complexed with 2gp, ca; mutant
    3. 2152511Domain d3hohc_: 3hoh C: [36087]
      complexed with 2gp, ca; mutant
    4. 2152512Domain d3hohd_: 3hoh D: [36088]
      complexed with 2gp, ca; mutant
  49. Domain(s) for 3rnt:
  50. Domain(s) for 3syu:
  51. Domain(s) for 3urp:
  52. Domain(s) for 4bir:
  53. Domain(s) for 4bu4:
  54. Domain(s) for 4gsp:
  55. Domain(s) for 4hoh:
    1. 2152539Domain d4hoha_: 4hoh A: [36118]
      complexed with 2gp, ca; mutant
    2. 2152540Domain d4hohb_: 4hoh B: [36119]
      complexed with 2gp, ca; mutant
    3. 2152541Domain d4hohc_: 4hoh C: [36120]
      complexed with 2gp, ca; mutant
    4. 2152542Domain d4hohd_: 4hoh D: [36121]
      complexed with 2gp, ca; mutant
  56. Domain(s) for 4rnt:
  57. Domain(s) for 5bir:
    1. 2152546Domain d5bira_: 5bir A: [36106]
      complexed with 2gp, ca; mutant
    2. 2152547Domain d5birb_: 5bir B: [36107]
      complexed with 2gp, ca; mutant
  58. Domain(s) for 5bu4:
  59. Domain(s) for 5gsp:
  60. Domain(s) for 5hoh:
    1. 2152520Domain d5hoha_: 5hoh A: [36096]
      complexed with 2gp, ca; mutant
    2. 2152521Domain d5hohb_: 5hoh B: [36097]
      complexed with 2gp, ca; mutant
    3. 2152522Domain d5hohc_: 5hoh C: [36098]
      complexed with 2gp, ca; mutant
    4. 2152523Domain d5hohd_: 5hoh D: [36099]
      complexed with 2gp, ca; mutant
  61. Domain(s) for 5rnt:
  62. Domain(s) for 6gsp:
  63. Domain(s) for 6rnt:
  64. Domain(s) for 7gsp:
    1. 2152535Domain d7gspa_: 7gsp A: [36108]
      complexed with po4, sgp
    2. 2152536Domain d7gspb_: 7gsp B: [36109]
      complexed with po4, sgp
  65. Domain(s) for 7rnt:
  66. Domain(s) for 8rnt:
  67. Domain(s) for 9rnt:

More info for Species Fungus (Aspergillus oryzae) [TaxId:5062] from d.1.1.4 RNase T1

Timeline for Species Fungus (Aspergillus oryzae) [TaxId:5062] from d.1.1.4 RNase T1: