SCOP 1.75: Family c.97.1.1: Cytidine deaminase

Lineage for Family c.97.1.1: Cytidine deaminase

1. Root: SCOP 1.75

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.1: Cytidine deaminase-like [53927] (5 families)
   contains extra C-terminal strand 5, order 21345

5. Family c.97.1.1: Cytidine deaminase [53928] (3 proteins)
   strand 5 is antiparallel to strand 4

Proteins:

1. Blasticidin-S deaminase [142831] (1 species)

   • Species Aspergillus terreus [TaxId:33178] [142832] (4 PDB entries)
     Uniprot P78986 2-126

2. mono-domain cytidine deaminase [75327] (5 species)

   1. Species Bacillus anthracis [TaxId:1392] [142829] (1 PDB entry)
      Uniprot Q81LT6 1-124

   2. Species Bacillus subtilis [TaxId:1423] [75328] (4 PDB entries)
      Uniprot P19079

   3. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [110764] (1 PDB entry)
      Uniprot Q06549

   4. Species Human (Homo sapiens) [TaxId:9606] [102711] (1 PDB entry)

   5. Species Mouse (Mus musculus) [TaxId:10090] [142830] (3 PDB entries)
      Uniprot P56389 10-146

3. Two-domain cytidine deaminase [53929] (1 species)
   duplication: consists of two similar domains; contains extra helices in the N-terminal domain

   • Species Escherichia coli [TaxId:562] [53930] (4 PDB entries)

More info for Family c.97.1.1: Cytidine deaminase

Timeline for Family c.97.1.1: Cytidine deaminase:

• Family c.97.1.1: Cytidine deaminase first appeared (with stable ids) in SCOP 1.55
  
• Family c.97.1.1: Cytidine deaminase appears in SCOP 1.73
  
• Family c.97.1.1: Cytidine deaminase appears in SCOPe 2.01
  
• Family c.97.1.1: Cytidine deaminase appears in the current release, SCOPe 2.08