SCOPe 2.07: Superfamily c.97.1: Cytidine deaminase-like

Lineage for Superfamily c.97.1: Cytidine deaminase-like

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.97: Cytidine deaminase-like [53926] (2 superfamilies)
   core: alpha-beta(2)-(alpha-beta)2; 3 layers (a/b/a); mixed beta-sheet of 4 strands, order 2134; strand 1 is antiparallel to the rest

4. Superfamily c.97.1: Cytidine deaminase-like [53927] (7 families)
   contains extra C-terminal strand 5, order 21345

Families:

1. c.97.1.1: Cytidine deaminase [53928] (4 proteins)
   strand 5 is antiparallel to strand 4

2. c.97.1.2: Deoxycytidylate deaminase-like [89800] (8 proteins)
   strand 5 is parallel to strand 4

3. c.97.1.3: Hypothetical protein TM1506 [110651] (1 protein)
   strand 5 is parallel to strand 4
   automatically mapped to Pfam PF08973

4. c.97.1.4: AICAR transformylase domain of bifunctional purine biosynthesis enzyme ATIC [64198] (2 proteins)
   duplication: consists of two domains of this fold with extra secondary structures within and in between the two core motifs

5. c.97.1.5: FdhD/NarQ [159821] (1 protein)
   Pfam PF02634; contains extra N-terminal beta-hairpin arm, involved in dimerization, and an alpha+beta subdomain of beta-grasp fold (54235)

6. c.97.1.6: apolipoprotein B messenger RNA-editing enzyme catalytic (APOBEC) cytidine deaminase domains [310632] (5 proteins)
   strand 5 is parallel to strand 4
   Pfam PF08210; Pfam PF05240

7. c.97.1.0: automated matches [191471] (1 protein)
   not a true family

More info for Superfamily c.97.1: Cytidine deaminase-like

Timeline for Superfamily c.97.1: Cytidine deaminase-like:

• Superfamily c.97.1: Cytidine deaminase-like first appeared (with stable ids) in SCOP 1.55, called Superfamily c.97.1: Cytidine deaminase
  
• Superfamily c.97.1: Cytidine deaminase-like appears in SCOPe 2.06
  
• Superfamily c.97.1: Cytidine deaminase-like appears in the current release, SCOPe 2.08