SCOPe 2.08: Protein: Ovotransferrin

Lineage for Protein: Ovotransferrin

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.2: Transferrin [53888] (4 proteins)
further duplication: composed of two two-domain lobes
Protein Ovotransferrin [53894] (2 species)

Species:

Chicken (Gallus gallus) [TaxId:9031] [53896] (9 PDB entries)
Uniprot P02789
1. Domains for 1aiv:
  1. Domain d1aiva1: 1aiv A:1-334 [35885]
  2. Domain d1aiva2: 1aiv A:335-686 [35886]
2. Domain for 1iej:
  - Domain d1ieja_: 1iej A: [62328]
    N-terminal lobe only
    complexed with co3, fe
3. Domain for 1iq7:
  - Domain d1iq7a_: 1iq7 A: [66261]
    C-terminal lobe only
    complexed with nag, so4
4. Domains for 1n04:
  1. Domain d1n04a1: 1n04 A:4-334 [91504]
    complexed with co3, fe, ful
  2. Domain d1n04a2: 1n04 A:335-686 [91505]
    complexed with co3, fe, ful
5. Domain for 1nft:
  - Domain d1nfta_: 1nft A: [35881]
    N-terminal lobe only
    complexed with fe, nta, so4
6. Domain for 1nnt:
  - Domain d1nnta_: 1nnt A: [35884]
    N-terminal lobe only
    complexed with co3, fe
7. Domains for 1ovt:
  1. Domain d1ovta1: 1ovt A:5-334 [35882]
    complexed with co3, fe
  2. Domain d1ovta2: 1ovt A:335-686 [35883]
    complexed with co3, fe
8. Domains for 1ryx:
  1. Domain d1ryxa1: 1ryx A:1-334 [105128]
  2. Domain d1ryxa2: 1ryx A:335-686 [105129]
9. Domain for 1tfa:
  - Domain d1tfaa_: 1tfa A: [35880]
    N-terminal lobe only
    complexed with so4
Duck (Anas platyrhynchos) [TaxId:8839] [53895] (5 PDB entries)
1. Domains for 1aov:
  1. Domain d1aova1: 1aov A:1-334 [35878]
  2. Domain d1aova2: 1aov A:335-686 [35879]
2. Domains for 1dot:
  1. Domain d1dota1: 1dot A:1-334 [35876]
    complexed with co3, fe, fuc, nag
  2. Domain d1dota2: 1dot A:335-686 [35877]
    complexed with co3, fe, fuc, nag
3. Domain for 1gv8:
  - Domain d1gv8a_: 1gv8 A: [65606]
    domain II in the N-terminal lobe
    complexed with co3, fe, gly
    fragment; missing more than one-third of the common structure and/or sequence
4. Domain for 1gvc:
  - Domain d1gvca_: 1gvc A: [65607]
    domain II in the N-terminal lobe
    complexed with co3, fe, nta
    fragment; missing more than one-third of the common structure and/or sequence
5. Domain for 1ovb:
  - Domain d1ovba_: 1ovb A: [35875]
    domain II in the N-terminal lobe
    complexed with co3, fe
    fragment; missing more than one-third of the common structure and/or sequence

More info for Protein Ovotransferrin from c.94.1.2: Transferrin

Timeline for Protein Ovotransferrin from c.94.1.2: Transferrin:

Protein Ovotransferrin from c.94.1.2: Transferrin first appeared (with stable ids) in SCOP 1.55
Protein Ovotransferrin from c.94.1.2: Transferrin appears in SCOPe 2.07