Lineage for Protein: Lactoferrin

  1. Root: SCOP 1.65
  2. 305035Class c: Alpha and beta proteins (a/b) [51349] (121 folds)
  3. 321832Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 321833Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 322136Family c.94.1.2: Transferrin [53888] (3 proteins)
    further duplication: composed of two two-domain lobes
  6. 322137Protein Lactoferrin [53889] (6 species)

Species:

  1. 322138Arabian camel (Camelus dromedarius) [TaxId:9838] [64195] (2 PDB entries)
    1. Domains for 1dtz:
      1. 322139Domain d1dtza1: 1dtz A:1-333 [59134]
      2. 322140Domain d1dtza2: 1dtz A:334-689 [59135]
    2. Domains for 1i6q:
      1. 322141Domain d1i6qa1: 1i6q A:1-333 [66043]
      2. 322142Domain d1i6qa2: 1i6q A:334-689 [66044]
        complexed with co3, fe
  2. 322143Cow (Bos taurus) [TaxId:9913] [53891] (1 PDB entry)
  3. 322146Domestic water buffalo (Bubalus arnee bubalis) [TaxId:89462] [53892] (2 PDB entries)
    1. Domains for 1biy:
      1. 322149Domain d1biy_1: 1biy 1-333 [35863]
      2. 322150Domain d1biy_2: 1biy 334-689 [35864]
        complexed with co3, fe
    2. Domains for 1ce2:
      1. 322147Domain d1ce2a1: 1ce2 A:1-333 [35861]
      2. 322148Domain d1ce2a2: 1ce2 A:334-689 [35862]
        complexed with co3, fe
  4. 322151Goat (Capra hircus) [TaxId:9925] [89791] (1 PDB entry)
  5. 322154Horse (Equus caballus) [TaxId:9796] [53893] (6 PDB entries)
    1. Domains for 1b1x:
      1. 322155Domain d1b1xa1: 1b1x A:1-333 [35865]
      2. 322156Domain d1b1xa2: 1b1x A:334-689 [35866]
        complexed with co3, fe
    2. Domains for 1b7u:
      1. 322165Domain d1b7ua1: 1b7u A:1-333 [35873]
      2. 322166Domain d1b7ua2: 1b7u A:334-689 [35874]
    3. Domains for 1b7z:
      1. 322157Domain d1b7za1: 1b7z A:1-333 [35867]
      2. 322158Domain d1b7za2: 1b7z A:334-689 [35868]
        complexed with fe, oxl
    4. Domains for 1f9b:
      1. 322159Domain d1f9ba1: 1f9b A:1-333 [35869]
      2. 322160Domain d1f9ba2: 1f9b A:334-689 [35870]
        complexed with 3id, bct, fe
    5. Domains for 1i6b:
      1. 322163Domain d1i6ba1: 1i6b A:1-333 [66036]
      2. 322164Domain d1i6ba2: 1i6b A:334-689 [66037]
    6. Domains for 1qjm:
      1. 322161Domain d1qjma1: 1qjm A:1-333 [35871]
      2. 322162Domain d1qjma2: 1qjm A:334-689 [35872]
        complexed with co3, sm
  6. 322167Human (Homo sapiens) [TaxId:9606] [53890] (20 PDB entries)
    1. Domains for 1b0l:
      1. 322177Domain d1b0la1: 1b0l A:1-334 [35847]
      2. 322178Domain d1b0la2: 1b0l A:335-691 [35848]
        complexed with crb, mtl; mutant
    2. Domains for 1bka:
      1. 322187Domain d1bka_1: 1bka 4-334 [35852]
      2. 322188Domain d1bka_2: 1bka 335-691 [35853]
        complexed with fe, oxl
    3. Domains for 1cb6:
      1. 322172Domain d1cb6a1: 1cb6 A:1001-1334 [35840]
      2. 322173Domain d1cb6a2: 1cb6 A:1335-1691 [35841]
        complexed with cl
    4. Domain for 1dsn:
    5. Domain for 1eh3:
      • 322174Domain d1eh3a_: 1eh3 A: [35842]
        N-terminal lobe
        complexed with co3, fe; mutant
    6. Domains for 1fck:
      1. 322179Domain d1fcka1: 1fck A:1-334 [35843]
      2. 322180Domain d1fcka2: 1fck A:335-691 [35844]
        complexed with ce, co3
    7. Domain for 1h43:
      • 322181Domain d1h43a_: 1h43 A: [76672]
        N-terminal lobe
        complexed with co3, fe; mutant
    8. Domain for 1h44:
      • 322170Domain d1h44a_: 1h44 A: [76673]
        N-terminal lobe
        complexed with co3, fe; mutant
    9. Domain for 1h45:
      • 322168Domain d1h45a_: 1h45 A: [76674]
        N-terminal lobe
        complexed with co3, fe; mutant
    10. Domain for 1hse:
    11. Domains for 1l5t:
      1. 322193Domain d1l5ta_: 1l5t A: [73601]
      2. 322194Domain d1l5tb_: 1l5t B: [73602]
        N-terminal lobe
        mutant
    12. Domains for 1lcf:
      1. 322175Domain d1lcf_1: 1lcf 1-334 [35838]
      2. 322176Domain d1lcf_2: 1lcf 335-691 [35839]
        complexed with co3, cu, nag, oxl
    13. Domain for 1lct:
    14. Domains for 1lfg:
      1. 322182Domain d1lfg_1: 1lfg 1-334 [35845]
      2. 322183Domain d1lfg_2: 1lfg 335-691 [35846]
        complexed with co3, fe, fuc, nag
    15. Domains for 1lfh:
      1. 322191Domain d1lfh_1: 1lfh 1-334 [35856]
      2. 322192Domain d1lfh_2: 1lfh 335-691 [35857]
        complexed with cl
    16. Domains for 1lfi:
      1. 322185Domain d1lfi_1: 1lfi 1-334 [35850]
      2. 322186Domain d1lfi_2: 1lfi 335-691 [35851]
        complexed with co3, cu, fuc, nag
    17. Domain for 1lgb:
      • 322197Domain d1lgbc_: 1lgb C: [35858]
        Other proteins in same PDB: d1lgb.1
        N2-fragment (one domain fragment)
        complexed with ca, fuc, gal, man, mn, nag
    18. Domains for 1n76:
      1. 322195Domain d1n76a1: 1n76 A:2-334 [80226]
      2. 322196Domain d1n76a2: 1n76 A:335-691 [80227]
        complexed with co3, fe, na
    19. Domain for 1vfd:
    20. Domain for 1vfe:

More info for Protein Lactoferrin from c.94.1.2: Transferrin

Timeline for Protein Lactoferrin from c.94.1.2: Transferrin: