SCOPe 2.08: Family c.94.1.2: Transferrin

Lineage for Family c.94.1.2: Transferrin

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (4 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.2: Transferrin [53888] (4 proteins)
   further duplication: composed of two two-domain lobes

Proteins:

1. Lactoferrin [53889] (6 species)

   1. Species Camel (Camelus dromedarius) [TaxId:9838] [64195] (2 PDB entries)

   2. Species Cow (Bos taurus) [TaxId:9913] [53891] (20 PDB entries)

   3. Species Domestic water buffalo (Bubalus arnee bubalis) [TaxId:89462] [53892] (2 PDB entries)

   4. Species Goat (Capra hircus) [TaxId:9925] [89791] (1 PDB entry)

   5. Species Horse (Equus caballus) [TaxId:9796] [53893] (7 PDB entries)

   6. Species Human (Homo sapiens) [TaxId:9606] [53890] (21 PDB entries)

2. Ovotransferrin [53894] (2 species)

   1. Species Chicken (Gallus gallus) [TaxId:9031] [53896] (9 PDB entries)
      Uniprot P02789

   2. Species Duck (Anas platyrhynchos) [TaxId:8839] [53895] (5 PDB entries)

3. Transferrin [53897] (3 species)

   1. Species Human (Homo sapiens) [TaxId:9606] [53899] (20 PDB entries)

   2. Species Pig (Sus scrofa) [TaxId:9823] [69626] (1 PDB entry)

   3. Species Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53898] (2 PDB entries)

4. automated matches [190754] (1 species)
   not a true protein

   • Species Human (Homo sapiens) [TaxId:9606] [187949] (3 PDB entries)

More info for Family c.94.1.2: Transferrin

Timeline for Family c.94.1.2: Transferrin:

• Family c.94.1.2: Transferrin first appeared (with stable ids) in SCOP 1.55
  
• Family c.94.1.2: Transferrin appears in SCOPe 2.07