SCOP 1.63: Protein: Glutamate receptor ligand binding core

Lineage for Protein: Glutamate receptor ligand binding core

Root: SCOP 1.63
Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families)
Similar in architecture to the superfamily I but partly differs in topology
Family c.94.1.1: Phosphate binding protein-like [53851] (19 proteins)
Protein Glutamate receptor ligand binding core [53881] (2 species)

Species:

Rat (Rattus norvegicus), GluR2 [TaxId:10116] [53882] (18 PDB entries)
1. Domains for 1ftj:
  1. Domain d1ftja_: 1ftj A: [35826]
  2. Domain d1ftjb_: 1ftj B: [35827]
  3. Domain d1ftjc_: 1ftj C: [35828]
    complexed with glu, zn
2. Domain for 1ftk:
  - Domain d1ftka_: 1ftk A: [35819]
    complexed with kai
3. Domains for 1ftl:
  1. Domain d1ftla_: 1ftl A: [35823]
  2. Domain d1ftlb_: 1ftl B: [35824]
    complexed with dnq, so4
4. Domains for 1ftm:
  1. Domain d1ftma_: 1ftm A: [35820]
  2. Domain d1ftmb_: 1ftm B: [35821]
  3. Domain d1ftmc_: 1ftm C: [35822]
    complexed with amq, zn
5. Domains for 1fto:
  1. Domain d1ftoa_: 1fto A: [35829]
  2. Domain d1ftob_: 1fto B: [35830]
6. Domain for 1fw0:
  - Domain d1fw0a_: 1fw0 A: [35831]
    complexed with kai
7. Domain for 1gr2:
  - Domain d1gr2a_: 1gr2 A: [35825]
    complexed with kai
8. Domains for 1lb8:
  1. Domain d1lb8a_: 1lb8 A: [73800]
  2. Domain d1lb8b_: 1lb8 B: [73801]
    complexed with amq; mutant
9. Domains for 1lb9:
  1. Domain d1lb9a_: 1lb9 A: [73802]
  2. Domain d1lb9b_: 1lb9 B: [73803]
    complexed with dnq, so4; mutant
10. Domain for 1lbb:
  - Domain d1lbba_: 1lbb A: [73804]
    complexed with kai; mutant
11. Domains for 1lbc:
  1. Domain d1lbca_: 1lbc A: [73805]
  2. Domain d1lbcb_: 1lbc B: [73806]
  3. Domain d1lbcc_: 1lbc C: [73807]
    complexed with cyz, glu, zn; mutant
12. Domains for 1m5b:
  1. Domain d1m5ba_: 1m5b A: [78637]
  2. Domain d1m5bb_: 1m5b B: [78638]
  3. Domain d1m5bc_: 1m5b C: [78639]
    complexed with bn1, zn
13. Domain for 1m5c:
  - Domain d1m5ca_: 1m5c A: [78640]
    complexed with brh
14. Domain for 1m5d:
  - Domain d1m5da_: 1m5d A: [78641]
    complexed with brh, so4; mutant
15. Domains for 1m5e:
  1. Domain d1m5ea_: 1m5e A: [78642]
  2. Domain d1m5eb_: 1m5e B: [78643]
  3. Domain d1m5ec_: 1m5e C: [78644]
    complexed with act, am1, zn
16. Domains for 1m5f:
  1. Domain d1m5fa_: 1m5f A: [78645]
  2. Domain d1m5fb_: 1m5f B: [78646]
  3. Domain d1m5fc_: 1m5f C: [78647]
    complexed with act, am1, zn; mutant
17. Domains for 1mm6:
  1. Domain d1mm6a_: 1mm6 A: [79296]
  2. Domain d1mm6b_: 1mm6 B: [79297]
    complexed with gol, qus, so4
18. Domains for 1mm7:
  1. Domain d1mm7a_: 1mm7 A: [79298]
  2. Domain d1mm7b_: 1mm7 B: [79299]
  3. Domain d1mm7c_: 1mm7 C: [79300]
    complexed with qus, zn
Synechocystis sp., GluR0 [TaxId:1143] [64192] (3 PDB entries)
1. Domain for 1ii5:
  - Domain d1ii5a_: 1ii5 A: [62412]
    complexed with glu
2. Domain for 1iit:
  - Domain d1iita_: 1iit A: [62460]
    complexed with ser
3. Domain for 1iiw:
  - Domain d1iiwa_: 1iiw A: [62461]

More info for Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like

Timeline for Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like:

Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like first appeared (with stable ids) in SCOP 1.55, called Protein Glutamate receptor ligand binding core (GluR2) from c.94.1.1: Phosphate binding protein-like
Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like appears in SCOP 1.61
Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like appears in SCOP 1.65
Protein Glutamate receptor ligand binding core from c.94.1.1: Phosphate binding protein-like appears in the current release, SCOPe 2.08