Lineage for Family c.94.1.1: Phosphate binding protein-like

  1. Root: SCOP 1.69
  2. 473232Class c: Alpha and beta proteins (a/b) [51349] (136 folds)
  3. 494730Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest
  4. 494731Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families) (S)
    Similar in architecture to the superfamily I but partly differs in topology
  5. 494732Family c.94.1.1: Phosphate binding protein-like [53851] (28 proteins)

Proteins:

  1. 494733Alginate-binding periplasmic protein AlgQ2 [69624] (1 species)
  2. 494738ATP phosphoribosyltransferase (ATP-PRTase, HisG), catalytic domain [82559] (3 species)
    there is an additional C-terminal allosteric domain in some species
    1. 494739Species Escherichia coli [TaxId:562] [102698] (2 PDB entries)
    2. 494742Species Mycobacterium tuberculosis [TaxId:1773] [82560] (2 PDB entries)
    3. 494745Species Thermotoga maritima [TaxId:243274] [102699] (2 PDB entries)
  3. 494750Cofactor-binding fragment of LysR-type protein CysB [53886] (1 species)
  4. 494753D-maltodextrin-binding protein, MBP [53862] (4 species)
    contains a few additional helices in the C-terminal extension; homologous to thiaminase I
    1. 494754Species Alicyclobacillus acidocaldarius [TaxId:405212] [102690] (3 PDB entries)
    2. 494760Species Archaeon Pyrococcus furiosus [TaxId:2261] [53864] (1 PDB entry)
    3. 494762Species Archaeon Thermococcus litoralis [TaxId:2265] [64191] (1 PDB entry)
      trehalose maltose-binding protein
    4. 494764Species Escherichia coli [TaxId:562] [53863] (37 PDB entries)
  5. 494811Dipeptide-binding protein [53870] (1 species)
    similar domain organization to oligopeptide-binding protein, OPPA
  6. 494818Ferric-binding protein FbpA [53867] (3 species)
    1. 494819Species Haemophilus influenzae [TaxId:727] [53868] (5 PDB entries)
    2. 494825Species Mannheimia haemolytica [TaxId:75985] [102691] (3 PDB entries)
    3. 494829Species Neisseria gonorrhoeae [53869] (4 PDB entries)
  7. 494858Glutamate receptor ligand binding core [53881] (2 species)
    1. 494859Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] [53882] (43 PDB entries)
    2. 494958Species Synechocystis sp., GluR0 [TaxId:1143] [64192] (3 PDB entries)
  8. 494962Glutamine-binding protein [53879] (1 species)
  9. 494967Glycine betaine-binding periplasmic protein ProX [102702] (1 species)
  10. 494971Histidine-binding protein [53872] (2 species)
    1. 494972Species Escherichia coli [TaxId:562] [53873] (1 PDB entry)
    2. 494975Species Salmonella typhimurium [TaxId:90371] [53874] (1 PDB entry)
  11. 494977Hydrogen peroxide-inducible genes LysR-type activator OxyR, regulatory domain [64193] (1 species)
  12. 494982Hypothetical protein PG110 (SA0422, MW0418) [102700] (1 species)
  13. 494985Hypothetical protein YliB [102692] (1 species)
    similar domain organization to oligo- and dipeptide-binding protein
  14. 494989Lysine-,arginine-,ornithine-binding (LAO) protein [53856] (1 species)
  15. 494996LysR-type regulatory protein CbnR [89789] (1 species)
  16. 495004LysR-type regulatory protein DntR [110748] (1 species)
  17. 495010Molybdate-binding protein, ModA [53883] (2 species)
    1. 495011Species Azotobacter vinelandii [TaxId:354] [53885] (1 PDB entry)
    2. 495013Species Escherichia coli [TaxId:562] [53884] (2 PDB entries)
  18. 495016N-methyl-D-aspartate receptor subunit 1 [89787] (1 species)
  19. 495023Nickel-binding periplasmic protein NikA [102694] (1 species)
    similar domain organization to oligo- and dipeptide-binding protein
  20. 495029Oligo-peptide binding protein (OPPA) [53852] (1 species)
    contains an additional alpha+beta domain inserted in the N-terminal domain
  21. 495064Osmoprotection protein ProX [110750] (1 species)
    functionally related to the bacterial ProX
  22. 495075Phosphate-binding protein [53860] (2 species)
    1. 495076Species Escherichia coli [TaxId:562] [53861] (13 PDB entries)
    2. 495091Species Mycobacterium tuberculosis [TaxId:1773] [110747] (1 PDB entry)
  23. 495094Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain [53854] (1 species)
  24. 495101Putative GluR0 ligand binding core [102696] (1 species)
  25. 495105Putrescine receptor (PotF) [53877] (1 species)
  26. 495111Spermidine/putrescine-binding protein PotD [53875] (1 species)
  27. 495118Sulphate-binding protein [53858] (1 species)
  28. 495121Thiaminase I [53865] (1 species)
    contains a few additional helices in the C-terminal extension; homologous to MBP

More info for Family c.94.1.1: Phosphate binding protein-like

Timeline for Family c.94.1.1: Phosphate binding protein-like: