SCOP 1.63: Family c.94.1.1: Phosphate binding protein-like

Lineage for Family c.94.1.1: Phosphate binding protein-like

1. Root: SCOP 1.63

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.94: Periplasmic binding protein-like II [53849] (1 superfamily)
   consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
   mixed beta-sheet of 5 strands, order 21354; strand 5 is antiparallel to the rest

4. Superfamily c.94.1: Periplasmic binding protein-like II [53850] (2 families)
   Similar in architecture to the superfamily I but partly differs in topology

5. Family c.94.1.1: Phosphate binding protein-like [53851] (19 proteins)

Proteins:

1. Alginate-binding periplasmic protein AlgQ2 [69624] (1 species)

   • Species Sphingomonas sp. [69625] (1 PDB entry)

2. ATP phosphoribosyltransferase (ATP-PRTase), catalytic domain [82559] (1 species)

   • Species Mycobacterium tuberculosis [TaxId:1773] [82560] (2 PDB entries)

3. Cofactor-binding fragment of CysB [53886] (1 species)

   • Species Klebsiella aerogenes [TaxId:28451] [53887] (1 PDB entry)

4. D-maltodextrin-binding protein, MBP [53862] (3 species)
   contains a few additional helices in the C-terminal extension; homologous to thiaminase I

   1. Species Archaeon Pyrococcus furiosus [TaxId:2261] [53864] (1 PDB entry)

   2. Species Archaeon Thermococcus litoralis [TaxId:2265] [64191] (1 PDB entry)
      trehalose maltose-binding protein

   3. Species Escherichia coli [TaxId:562] [53863] (29 PDB entries)

5. Dipeptide-binding protein [53870] (1 species)

   • Species Escherichia coli [TaxId:562] [53871] (2 PDB entries)

6. Ferric-binding protein [53867] (2 species)

   1. Species Haemophilus influenzae [TaxId:727] [53868] (2 PDB entries)

   2. Species Neisseria gonorrhoeae [53869] (1 PDB entry)

7. Glutamate receptor ligand binding core [53881] (2 species)

   1. Species Rat (Rattus norvegicus), GluR2 [TaxId:10116] [53882] (18 PDB entries)

   2. Species Synechocystis sp., GluR0 [TaxId:1143] [64192] (3 PDB entries)

8. Glutamine-binding protein [53879] (1 species)

   • Species Escherichia coli [TaxId:562] [53880] (2 PDB entries)

9. Histidine-binding protein [53872] (2 species)

   1. Species Escherichia coli [TaxId:562] [53873] (1 PDB entry)

   2. Species Salmonella typhimurium [TaxId:90371] [53874] (1 PDB entry)

10. Hydrogen peroxide-inducible genes activator OxyR, regulatory domain [64193] (1 species)

    • Species Escherichia coli [TaxId:562] [64194] (2 PDB entries)

11. Lysine-,arginine-,ornithine-binding (LAO) protein [53856] (1 species)

    • Species Salmonella typhimurium [TaxId:90371] [53857] (5 PDB entries)

12. Molybdate-binding protein, ModA [53883] (2 species)

    1. Species Azotobacter vinelandii [TaxId:354] [53885] (1 PDB entry)

    2. Species Escherichia coli [TaxId:562] [53884] (2 PDB entries)

13. Oligo-peptide binding protein (OPPA) [53852] (1 species)
    contains an additional alpha+beta domain inserted in the N-terminal domain

    • Species Salmonella typhimurium [TaxId:90371] [53853] (32 PDB entries)

14. Phosphate-binding protein [53860] (1 species)

    • Species Escherichia coli [TaxId:562] [53861] (13 PDB entries)

15. Porphobilinogen deaminase (hydroxymethylbilane synthase), N-terminal domain [53854] (1 species)

    • Species Escherichia coli [TaxId:562] [53855] (5 PDB entries)

16. Putrescine receptor (PotF) [53877] (1 species)

    • Species Escherichia coli [TaxId:562] [53878] (1 PDB entry)

17. Spermidine/putrescine-binding protein PotD [53875] (1 species)

    • Species Escherichia coli [TaxId:562] [53876] (2 PDB entries)

18. Sulphate-binding protein [53858] (1 species)

    • Species Salmonella typhimurium [TaxId:90371] [53859] (1 PDB entry)

19. Thiaminase I [53865] (1 species)
    contains a few additional helices in the C-terminal extension; homologous to MBP

    • Species Paenibacillus thiaminolyticus [TaxId:49283] [53866] (3 PDB entries)

More info for Family c.94.1.1: Phosphate binding protein-like

Timeline for Family c.94.1.1: Phosphate binding protein-like:

• Family c.94.1.1: Phosphate binding protein-like first appeared (with stable ids) in SCOP 1.55
  
• Family c.94.1.1: Phosphate binding protein-like appears in SCOP 1.61
  
• Family c.94.1.1: Phosphate binding protein-like appears in SCOP 1.65
  
• Family c.94.1.1: Phosphate binding protein-like appears in the current release, SCOPe 2.08