SCOPe 2.07: Protein: Glycogen phosphorylase

Lineage for Protein: Glycogen phosphorylase

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.87: UDP-Glycosyltransferase/glycogen phosphorylase [53755] (1 superfamily)
consists of two non-similar domains with 3 layers (a/b/a) each
domain 1: parallel beta-sheet of 7 strands, order 3214567
domain 2: parallel beta-sheet of 6 strands, order 321456

Superfamily c.87.1: UDP-Glycosyltransferase/glycogen phosphorylase [53756] (14 families)
Family c.87.1.4: Oligosaccharide phosphorylase [53766] (3 proteins)
automatically mapped to Pfam PF00343
Protein Glycogen phosphorylase [53767] (3 species)
both domains are elaborated with many insertions

Species:

Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53770] (1 PDB entry)
- Domains for 1ygp:
  1. Domain d1ygpa_: 1ygp A: [35540]
    complexed with plp, po4
  2. Domain d1ygpb_: 1ygp B: [35541]
    complexed with plp, po4
Human (Homo sapiens) [TaxId:9606] [53768] (16 PDB entries)
1. Domains for 1em6:
  1. Domain d1em6a_: 1em6 A: [35471]
    complexed with cp4, mpd, nbg, plp
  2. Domain d1em6b_: 1em6 B: [35472]
    complexed with cp4, mpd, nbg, plp
2. Domains for 1exv:
  1. Domain d1exva_: 1exv A: [35476]
    complexed with 700, mpd, nbg, plp
  2. Domain d1exvb_: 1exv B: [35477]
    complexed with 700, mpd, nbg, plp
3. Domain for 1fa9:
  - Domain d1fa9a_: 1fa9 A: [35475]
    complexed with amp, glc, plp
4. Domains for 1fc0:
  1. Domain d1fc0a_: 1fc0 A: [35473]
    complexed with nbg, plp
  2. Domain d1fc0b_: 1fc0 B: [35474]
    complexed with nbg, plp
5. Domains for 1l5q:
  1. Domain d1l5qa_: 1l5q A: [77712]
    complexed with 700, cff, nbg, plp
  2. Domain d1l5qb_: 1l5q B: [77713]
    complexed with 700, cff, nbg, plp
6. Domains for 1l5r:
  1. Domain d1l5ra_: 1l5r A: [77714]
    complexed with 700, mrd, nbg, plp, rbf
  2. Domain d1l5rb_: 1l5r B: [77715]
    complexed with 700, mrd, nbg, plp, rbf
7. Domains for 1l5s:
  1. Domain d1l5sa_: 1l5s A: [77716]
    complexed with 700, mrd, nbg, plp, urc
  2. Domain d1l5sb_: 1l5s B: [77717]
    complexed with 700, mrd, nbg, plp, urc
8. Domains for 1l7x:
  1. Domain d1l7xa_: 1l7x A: [77807]
    complexed with 700, cff, mrd, nbg, plp
  2. Domain d1l7xb_: 1l7x B: [77808]
    complexed with 700, cff, mrd, nbg, plp
9. Domain for 2qll:
  - Domain d2qlla_: 2qll A: [150861]
    automated match to d1fa9a_
    complexed with plp
10. Domains for 2zb2:
  1. Domain d2zb2a_: 2zb2 A: [154299]
    automated match to d1fa9a_
    complexed with a46, glc, mes, mpd, plp
  2. Domain d2zb2b_: 2zb2 B: [154300]
    automated match to d1fa9a_
    complexed with a46, glc, mes, mpd, plp
11. Domains for 3ceh:
  1. Domain d3ceha_: 3ceh A: [156524]
    automated match to d1fc0a_
    complexed with ave, mes, nbg, plp, po4
  2. Domain d3cehb_: 3ceh B: [156525]
    automated match to d1fc0a_
    complexed with ave, mes, nbg, plp, po4
12. Domains for 3cej:
  1. Domain d3ceja1: 3cej A:23-830 [156526]
    automatically matched to d1noja_
    complexed with avf, nbg, plp
  2. Domain d3cejb1: 3cej B:23-830 [156527]
    automatically matched to d1noja_
    complexed with avf, nbg, plp
13. Domains for 3cem:
  1. Domain d3cema_: 3cem A: [156528]
    automated match to d1fc0a_
    complexed with avd, nbg, plp
  2. Domain d3cemb_: 3cem B: [156529]
    automated match to d1fc0a_
    complexed with avd, nbg, plp
14. Domains for 3dd1:
  1. Domain d3dd1a_: 3dd1 A: [173823]
    automated match to d1fa9a_
    complexed with 25d, cff, mes, mpd, nbg, plp
  2. Domain d3dd1b_: 3dd1 B: [173824]
    automated match to d1fa9a_
    complexed with 25d, cff, mes, mpd, nbg, plp
15. Domains for 3dds:
  1. Domain d3ddsa_: 3dds A: [173845]
    automated match to d1fa9a_
    complexed with 26b, cff, mes, mpd, nbg, plp, po4
  2. Domain d3ddsb_: 3dds B: [173846]
    automated match to d1fa9a_
    complexed with 26b, cff, mes, mpd, nbg, plp, po4
16. Domains for 3ddw:
  1. Domain d3ddwa_: 3ddw A: [173850]
    automated match to d1fa9a_
    complexed with 055, cff, mes, mpd, nbg, plp
  2. Domain d3ddwb_: 3ddw B: [173851]
    automated match to d1fa9a_
    complexed with 055, cff, mes, mpd, nbg, plp
Rabbit (Oryctolagus cuniculus) [TaxId:9986] [53769] (76 PDB entries)
Uniprot P00489 ! Uniprot P00489
1. Domain for 1a8i:
  - Domain d1a8ia_: 1a8i A: [35490]
    complexed with gls
2. Domains for 1abb:
  1. Domain d1abba_: 1abb A: [35536]
    complexed with imp, pdp, so4
  2. Domain d1abbb_: 1abb B: [35537]
    complexed with imp, pdp, so4
  3. Domain d1abbc_: 1abb C: [35538]
    complexed with imp, pdp, so4
  4. Domain d1abbd_: 1abb D: [35539]
    complexed with imp, pdp, so4
3. Domain for 1axr:
  - Domain d1axra_: 1axr A: [35504]
    complexed with htp, plp, po4
4. Domain for 1b4d:
  - Domain d1b4da_: 1b4d A: [35492]
    complexed with cra, imp, plp
5. Domain for 1bx3:
  - Domain d1bx3a_: 1bx3 A: [35497]
    complexed with plp
6. Domain for 1c50:
  - Domain d1c50a_: 1c50 A: [35512]
    complexed with chi, plp
7. Domain for 1c8k:
  - Domain d1c8ka_: 1c8k A: [35491]
    complexed with cpb, plp
8. Domain for 1c8l:
  - Domain d1c8la_: 1c8l A: [35498]
    complexed with bin, cff, gol, plp
9. Domain for 1e1y:
  - Domain d1e1ya_: 1e1y A: [35496]
    complexed with cpb, glc, plp, po3
10. Domain for 1fs4:
  - Domain d1fs4a_: 1fs4 A: [35511]
    complexed with cra, plp
11. Domain for 1ftq:
  - Domain d1ftqa_: 1ftq A: [35500]
    complexed with gl2, imp, plp
12. Domain for 1ftw:
  - Domain d1ftwa_: 1ftw A: [35501]
    complexed with gl5, plp
13. Domain for 1fty:
  - Domain d1ftya_: 1fty A: [35513]
    complexed with gl7, plp
14. Domain for 1fu4:
  - Domain d1fu4a_: 1fu4 A: [35514]
    complexed with gl9, plp
15. Domain for 1fu7:
  - Domain d1fu7a_: 1fu7 A: [35502]
    complexed with cr1, plp
16. Domain for 1fu8:
  - Domain d1fu8a_: 1fu8 A: [35515]
    complexed with cr6, plp
17. Domain for 1gfz:
  - Domain d1gfza_: 1gfz A: [35499]
    complexed with cff, imp, plp
18. Domain for 1gg8:
  - Domain d1gg8a_: 1gg8 A: [35517]
    complexed with glg, imp, plp
19. Domain for 1ggn:
  - Domain d1ggna_: 1ggn A: [35516]
    complexed with gls, plp
20. Domains for 1gpa:
  1. Domain d1gpaa_: 1gpa A: [35528]
    complexed with plp, so4
  2. Domain d1gpab_: 1gpa B: [35529]
    complexed with plp, so4
  3. Domain d1gpac_: 1gpa C: [35530]
    complexed with plp, so4
  4. Domain d1gpad_: 1gpa D: [35531]
    complexed with plp, so4
21. Domain for 1gpb:
  - Domain d1gpba_: 1gpb A: [35478]
    complexed with plp
22. Domain for 1gpy:
  - Domain d1gpya_: 1gpy A: [35518]
    complexed with g6p, plp
23. Domain for 1h5u:
  - Domain d1h5ua_: 1h5u A: [60655]
    complexed with chi, glc, plp
24. Domain for 1hlf:
  - Domain d1hlfa_: 1hlf A: [35503]
    complexed with gl4, plp
25. Domain for 1k06:
  - Domain d1k06a_: 1k06 A: [67908]
    complexed with bzd, plp
26. Domain for 1k08:
  - Domain d1k08a_: 1k08 A: [67909]
    complexed with bzd, plp
27. Domain for 1k0q:
  - Domain d1k0qa_: 1k0q A: [302610]
    automated match to d1p4ja_
    complexed with azc, plp
28. Domain for 1kti:
  - Domain d1ktia_: 1kti A: [68864]
    complexed with azc, plp
29. Domain for 1lwn:
  - Domain d1lwna_: 1lwn A: [74307]
    complexed with glc, plp
30. Domain for 1lwo:
  - Domain d1lwoa_: 1lwo A: [74308]
    complexed with chi, glc, plp
31. Domains for 1noi:
  1. Domain d1noia_: 1noi A: [35484]
    complexed with ntz, plp, po4
  2. Domain d1noib_: 1noi B: [35485]
    complexed with ntz, plp, po4
  3. Domain d1noic_: 1noi C: [35486]
    complexed with ntz, plp, po4
  4. Domain d1noid_: 1noi D: [35487]
    complexed with ntz, plp, po4
32. Domain for 1noj:
  - Domain d1noja_: 1noj A: [35479]
    complexed with ntz, plp, po4
33. Domain for 1nok:
  - Domain d1noka_: 1nok A: [35488]
    complexed with ntz, plp
34. Domain for 1p29:
  - Domain d1p29a_: 1p29 A: [93913]
    complexed with glc, plp
35. Domain for 1p2b:
  - Domain d1p2ba_: 1p2b A: [93914]
    complexed with glc, plp
36. Domain for 1p2d:
  - Domain d1p2da_: 1p2d A: [93925]
    complexed with glc, plp
37. Domain for 1p2g:
  - Domain d1p2ga_: 1p2g A: [93929]
    complexed with glc, plp
38. Domain for 1p4g:
  - Domain d1p4ga_: 1p4g A: [104064]
    complexed with cgf, plp
39. Domain for 1p4h:
  - Domain d1p4ha_: 1p4h A: [104065]
    complexed with cr6, plp, po4
40. Domain for 1p4j:
  - Domain d1p4ja_: 1p4j A: [104066]
    complexed with cbf, plp
41. Domains for 1pyg:
  1. Domain d1pyga_: 1pyg A: [35532]
    complexed with amp, pdp
  2. Domain d1pygb_: 1pyg B: [35533]
    complexed with amp, pdp
  3. Domain d1pygc_: 1pyg C: [35534]
    complexed with amp, pdp
  4. Domain d1pygd_: 1pyg D: [35535]
    complexed with amp, pdp
42. Domain for 1uzu:
  - Domain d1uzua_: 1uzu A: [108182]
    complexed with inr, plp
43. Domain for 2amv:
  - Domain d2amva_: 2amv A: [35505]
    complexed with bin, gol, plp
44. Domain for 2gpa:
  - Domain d2gpaa_: 2gpa A: [35493]
    complexed with glc, gol, plp
45. Domain for 2gpb:
  - Domain d2gpba_: 2gpb A: [35480]
    complexed with glc, plp
46. Domain for 2gpn:
  - Domain d2gpna_: 2gpn A: [35494]
47. Domain for 2pri:
  - Domain d2pria_: 2pri A: [35510]
    complexed with d6g, plp
48. Domain for 2prj:
  - Domain d2prja_: 2prj A: [35506]
    complexed with imp, nbg, plp
49. Domain for 2skc:
  - Domain d2skca_: 2skc A: [35507]
    complexed with fpo, glc, imp, plp
50. Domain for 2skd:
  - Domain d2skda_: 2skd A: [35508]
    complexed with glc, imp, plp, po4
51. Domain for 2ske:
  - Domain d2skea_: 2ske A: [35509]
    complexed with glc, imp, plp, po3
52. Domain for 3amv:
  - Domain d3amva_: 3amv A: [35495]
    complexed with bin, glc, gol, plp
53. Domain for 3gpb:
  - Domain d3gpba_: 3gpb A: [35481]
    complexed with g1p, plp
54. Domain for 3sym:
  - Domain d3syma_: 3sym A: [216609]
    automated match to d2gpaa_
    complexed with gp0
55. Domain for 3syr:
  - Domain d3syra_: 3syr A: [216610]
    automated match to d2gpaa_
    complexed with gpk
56. Domain for 3t3e:
  - Domain d3t3ea_: 3t3e A: [216655]
    automated match to d2gpaa_
    complexed with gpq
57. Domain for 3t3g:
  - Domain d3t3ga_: 3t3g A: [216658]
    automated match to d2gpaa_
    complexed with gpu
58. Domain for 3t3h:
  - Domain d3t3ha_: 3t3h A: [216659]
    automated match to d2gpaa_
    complexed with gpv
59. Domain for 3t3i:
  - Domain d3t3ia_: 3t3i A: [216660]
    automated match to d2gpaa_
    complexed with gpw
60. Domain for 4ej2:
  - Domain d4ej2a_: 4ej2 A: [192462]
    automated match to d1gpaa_
    complexed with d1f
61. Domain for 4eke:
  - Domain d4ekea_: 4eke A: [192463]
    automated match to d1gpaa_
    complexed with d1i
62. Domain for 4eky:
  - Domain d4ekya_: 4eky A: [192657]
    automated match to d1gpaa_
    complexed with d1j
63. Domain for 4el0:
  - Domain d4el0a_: 4el0 A: [192464]
    automated match to d1gpaa_
    complexed with d1k
64. Domain for 4el5:
  - Domain d4el5a_: 4el5 A: [192465]
    automated match to d1gpaa_
    complexed with d1m
65. Domain for 4gpb:
  - Domain d4gpba_: 4gpb A: [35482]
    complexed with gfp, plp
66. Domain for 5gpb:
  - Domain d5gpba_: 5gpb A: [35483]
    complexed with glc, gpm, plp
67. Domain for 5lrc:
  - Domain d5lrca_: 5lrc A: [335361]
    automated match to d2gpaa_
    complexed with 73e, plp
68. Domain for 5lre:
  - Domain d5lrea_: 5lre A: [334847]
    automated match to d2gpaa_
    complexed with dms, ks3, plp
69. Domain for 5lrf:
  - Domain d5lrfa_: 5lrf A: [335363]
    automated match to d2gpaa_
    complexed with dms, ks3, plp
70. Domain for 5o50:
  - Domain d5o50a_: 5o50 A: [339537]
    automated match to d2gpaa_
    complexed with 9l2, imp, plp
71. Domain for 6gpb:
  - Domain d6gpba_: 6gpb A: [35519]
    complexed with amp, glc, h2p, plp
72. Domain for 6y5c:
  - Domain d6y5ca_: 6y5c A: [393555]
    automated match to d2gpaa_
    complexed with o9t
73. Domain for 6y5o:
  - Domain d6y5oa_: 6y5o A: [393561]
    automated match to d2gpaa_
    complexed with o9z
74. Domains for 7gpb:
  1. Domain d7gpba_: 7gpb A: [35520]
    complexed with amp, plp, so4
  2. Domain d7gpbb_: 7gpb B: [35521]
    complexed with amp, plp, so4
  3. Domain d7gpbc_: 7gpb C: [35522]
    complexed with amp, plp, so4
  4. Domain d7gpbd_: 7gpb D: [35523]
    complexed with amp, plp, so4
75. Domain for 8gpb:
  - Domain d8gpba_: 8gpb A: [35489]
    complexed with amp, plp
76. Domains for 9gpb:
  1. Domain d9gpba_: 9gpb A: [35524]
    complexed with plp, so4
  2. Domain d9gpbb_: 9gpb B: [35525]
    complexed with plp, so4
  3. Domain d9gpbc_: 9gpb C: [35526]
    complexed with plp, so4
  4. Domain d9gpbd_: 9gpb D: [35527]
    complexed with plp, so4

More info for Protein Glycogen phosphorylase from c.87.1.4: Oligosaccharide phosphorylase

Timeline for Protein Glycogen phosphorylase from c.87.1.4: Oligosaccharide phosphorylase:

Protein Glycogen phosphorylase from c.87.1.4: Oligosaccharide phosphorylase first appeared (with stable ids) in SCOP 1.55
Protein Glycogen phosphorylase from c.87.1.4: Oligosaccharide phosphorylase appears in SCOPe 2.06
Protein Glycogen phosphorylase from c.87.1.4: Oligosaccharide phosphorylase appears in the current release, SCOPe 2.08