SCOP 1.71: Species: Rhodobacter capsulatus

Lineage for Species: Rhodobacter capsulatus

Root: SCOP 1.71
Class c: Alpha and beta proteins (a/b) [51349] (134 folds)

Fold c.81: Formate dehydrogenase/DMSO reductase, domains 1-3 [53705] (1 superfamily)
contains of two similar intertwined domains related by pseudo dyad; duplication
core: 3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32451

Superfamily c.81.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53706] (1 family)
molybdopterine enzyme
Family c.81.1.1: Formate dehydrogenase/DMSO reductase, domains 1-3 [53707] (9 proteins)
domain 1 (residues 1-55) binds Fe4S4 cluster in FDH but not DMSO reductase
Protein Dimethylsulfoxide reductase (DMSO reductase) [53708] (2 species)
Species Rhodobacter capsulatus [TaxId:1061] [53710] (10 PDB entries)

PDB entries in Species: Rhodobacter capsulatus:

Domain(s) for 1dmr:
- Domain d1dmr_2: 1dmr 3-625 [35312]
  Other proteins in same PDB: d1dmr_1
  complexed with 6mo, o, pgd
Domain(s) for 1dms:
- Domain d1dms_2: 1dms 3-625 [35314]
  Other proteins in same PDB: d1dms_1
  complexed with mm4, pgd
Domain(s) for 1e18:
- Domain d1e18a2: 1e18 A:3-625 [35315]
  Other proteins in same PDB: d1e18a1
  Tungsten-substituted
  complexed with 6wo, eoh, pgd
Domain(s) for 1e5v:
1. Domain d1e5va2: 1e5v A:3-625 [35320]
  Other proteins in same PDB: d1e5va1, d1e5vc1
2. Domain d1e5vc2: 1e5v C:3-625 [35321]
  Other proteins in same PDB: d1e5va1, d1e5vc1
  complexed with 2mo, pgd, so4
Domain(s) for 1e60:
1. Domain d1e60a2: 1e60 A:4-625 [35318]
  Other proteins in same PDB: d1e60a1, d1e60c1
2. Domain d1e60c2: 1e60 C:3-625 [35319]
  Other proteins in same PDB: d1e60a1, d1e60c1
  complexed with 2mo, pgd, so4
Domain(s) for 1e61:
1. Domain d1e61a2: 1e61 A:4-625 [35316]
  Other proteins in same PDB: d1e61a1, d1e61c1
2. Domain d1e61c2: 1e61 C:3-625 [35317]
  Other proteins in same PDB: d1e61a1, d1e61c1
  complexed with 2mo, pgd, so4
Domain(s) for 1h5n:
1. Domain d1h5na2: 1h5n A:4-625 [70895]
  Other proteins in same PDB: d1h5na1, d1h5nc1
2. Domain d1h5nc2: 1h5n C:3-625 [70897]
  Other proteins in same PDB: d1h5na1, d1h5nc1
  complexed with 6mo, pgd, so4
Domain(s) for 2dmr:
- Domain d2dmr_2: 2dmr 3-625 [35323]
  Other proteins in same PDB: d2dmr_1
  complexed with 4mo, o, pgd, so2
Domain(s) for 3dmr:
- Domain d3dmr_2: 3dmr 3-625 [35322]
  Other proteins in same PDB: d3dmr_1
  complexed with 6mo, o, pgd
Domain(s) for 4dmr:
- Domain d4dmr_2: 4dmr 3-625 [35313]
  Other proteins in same PDB: d4dmr_1
  complexed with 4mo, dms, o, pgd

More info for Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase)

Timeline for Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase):

Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase) first appeared (with stable ids) in SCOP 1.55
Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase) appears in SCOP 1.69
Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase) appears in SCOP 1.73
Species Rhodobacter capsulatus [TaxId:1061] from c.81.1.1 Dimethylsulfoxide reductase (DMSO reductase) appears in the current release, SCOPe 2.08