SCOPe 2.07: Protein: Tryptophan synthase, beta-subunit

Lineage for Protein: Tryptophan synthase, beta-subunit

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
consists of two similar domains related by pseudo dyad; duplication
core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214

Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families)
Family c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53687] (9 proteins)
Protein Tryptophan synthase, beta-subunit [53688] (4 species)

Species:

Mycobacterium tuberculosis [TaxId:1773] [267796] (2 PDB entries)
1. Domains for 2o2e:
  1. Domain d2o2ea_: 2o2e A: [264422]
    automated match to d1wdwb_
  2. Domain d2o2eb_: 2o2e B: [264423]
    automated match to d1wdwb_
2. Domains for 2o2j:
  1. Domain d2o2ja_: 2o2j A: [264424]
    automated match to d1wdwb_
  2. Domain d2o2jb_: 2o2j B: [264425]
    automated match to d1wdwb_
Pyrococcus furiosus [TaxId:2261] [142741] (2 PDB entries)
Uniprot Q8U093 1-386
1. Domains for 1v8z:
  1. Domain d1v8za1: 1v8z A:1-386 [119873]
    complexed with na, plp
  2. Domain d1v8zb_: 1v8z B: [119874]
    automated match to d2tysb_
    complexed with na, plp
  3. Domain d1v8zc_: 1v8z C: [119875]
    automated match to d2tysb_
    complexed with na, plp
  4. Domain d1v8zd_: 1v8z D: [119876]
    automated match to d2tysb_
    complexed with na, plp
2. Domains for 1wdw:
  1. Domain d1wdwb_: 1wdw B: [120917]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
  2. Domain d1wdwd_: 1wdw D: [120919]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
  3. Domain d1wdwf_: 1wdw F: [120921]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
  4. Domain d1wdwh_: 1wdw H: [120923]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
  5. Domain d1wdwj_: 1wdw J: [120925]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
  6. Domain d1wdwl_: 1wdw L: [120927]
    Other proteins in same PDB: d1wdwa_, d1wdwc_, d1wdwe_, d1wdwg_, d1wdwi_, d1wdwk_
    automated match to d1v8zb_
    complexed with plp
Salmonella enterica [TaxId:90371] [229810] (6 PDB entries)
1. Domain for 4hn4:
  - Domain d4hn4b_: 4hn4 B: [230038]
    Other proteins in same PDB: d4hn4a_
    automated match to d4hpxb_
    complexed with 0jo, bcn, cs, f9f, peg
2. Domain for 4hpj:
  - Domain d4hpjb_: 4hpj B: [230040]
    Other proteins in same PDB: d4hpja_
    automated match to d4hpxb_
    complexed with 1d0, bcn, cl, cs, f9f, peg
3. Domain for 4hpx:
  - Domain d4hpxb_: 4hpx B: [229813]
    Other proteins in same PDB: d4hpxa_
    automated match to d1kfjb_
    complexed with 0jo, bcn, bzi, cs, f9f, peg
4. Domain for 4ht3:
  - Domain d4ht3b_: 4ht3 B: [230249]
    Other proteins in same PDB: d4ht3a_
    automated match to d1kfjb_
    complexed with bcn, cl, cs, edo, f9f, peg, pg5, pge, plp
5. Domain for 4kkx:
  - Domain d4kkxb_: 4kkx B: [230330]
    Other proteins in same PDB: d4kkxa_
    automated match to d4hpxb_
    complexed with aq3, edo, f6f, na, peg, pge
6. Domain for 6o1h:
  - Domain d6o1hb_: 6o1h B: [380747]
    Other proteins in same PDB: d6o1ha_
    automated match to d4hpjb_
    complexed with 1d0, cl, cs, dms, f9f, hvk; mutant
Salmonella typhimurium [TaxId:90371] [53689] (56 PDB entries)
1. Domain for 1a50:
  - Domain d1a50b_: 1a50 B: [35280]
    Other proteins in same PDB: d1a50a_
    complexed with fip, na, plp
2. Domain for 1a5a:
  - Domain d1a5ab_: 1a5a B: [35276]
    Other proteins in same PDB: d1a5aa_
    complexed with k, plp; mutant
3. Domain for 1a5b:
  - Domain d1a5bb_: 1a5b B: [35275]
    Other proteins in same PDB: d1a5ba_
    complexed with igp, k, plp; mutant
4. Domain for 1a5s:
  - Domain d1a5sb_: 1a5s B: [35281]
    Other proteins in same PDB: d1a5sa_
    complexed with fip, na, plp, ser
5. Domain for 1beu:
  - Domain d1beub_: 1beu B: [35274]
    Other proteins in same PDB: d1beua_
    complexed with ipl, k, pls
6. Domain for 1bks:
  - Domain d1bksb_: 1bks B: [35285]
    Other proteins in same PDB: d1bksa_
    complexed with na, plp
7. Domain for 1c29:
  - Domain d1c29b_: 1c29 B: [35287]
    Other proteins in same PDB: d1c29a_
    complexed with he1, na, plp
8. Domain for 1c8v:
  - Domain d1c8vb_: 1c8v B: [35282]
    Other proteins in same PDB: d1c8va_
    complexed with he1, na, plp
9. Domain for 1c9d:
  - Domain d1c9db_: 1c9d B: [35286]
    Other proteins in same PDB: d1c9da_
    complexed with hf1, na, plp
10. Domain for 1cw2:
  - Domain d1cw2b_: 1cw2 B: [35278]
    Other proteins in same PDB: d1cw2a_
    complexed with hsp, na, plp
11. Domain for 1cx9:
  - Domain d1cx9b_: 1cx9 B: [35284]
    Other proteins in same PDB: d1cx9a_
    complexed with na, nhp, plp
12. Domain for 1fuy:
  - Domain d1fuyb_: 1fuy B: [35279]
    Other proteins in same PDB: d1fuya_
    complexed with fip, na, plp; mutant
13. Domain for 1k3u:
  - Domain d1k3ub_: 1k3u B: [72031]
    Other proteins in same PDB: d1k3ua_
    complexed with iad, na, plp
14. Domain for 1k7e:
  - Domain d1k7eb_: 1k7e B: [72098]
    Other proteins in same PDB: d1k7ea_
    complexed with iag, na, plp
15. Domain for 1k7f:
  - Domain d1k7fb_: 1k7f B: [72100]
    Other proteins in same PDB: d1k7fa_
    complexed with iav, plp
16. Domain for 1k7x:
  - Domain d1k7xb_: 1k7x B: [72135]
    Other proteins in same PDB: d1k7xa_
    complexed with na, plp; mutant
17. Domain for 1k8x:
  - Domain d1k8xb_: 1k8x B: [77289]
    Other proteins in same PDB: d1k8xa_
    complexed with na, plp; mutant
18. Domain for 1k8y:
  - Domain d1k8yb_: 1k8y B: [72184]
    Other proteins in same PDB: d1k8ya_
    complexed with 13p, na, plp; mutant
19. Domain for 1k8z:
  - Domain d1k8zb_: 1k8z B: [72186]
    Other proteins in same PDB: d1k8za_
    complexed with iag, na, plp; mutant
20. Domain for 1kfb:
  - Domain d1kfbb_: 1kfb B: [77370]
    Other proteins in same PDB: d1kfba_
    complexed with igp, plp; mutant
21. Domain for 1kfc:
  - Domain d1kfcb_: 1kfc B: [77372]
    Other proteins in same PDB: d1kfca_
    complexed with ipl, na, plp; mutant
22. Domain for 1kfe:
  - Domain d1kfeb_: 1kfe B: [77374]
    Other proteins in same PDB: d1kfea_
    complexed with na, pls; mutant
23. Domain for 1kfj:
  - Domain d1kfjb_: 1kfj B: [90959]
    Other proteins in same PDB: d1kfja_
    complexed with na, pls
24. Domain for 1kfk:
  - Domain d1kfkb_: 1kfk B: [90961]
    Other proteins in same PDB: d1kfka_
    complexed with na, plp
25. Domain for 1qop:
  - Domain d1qopb_: 1qop B: [35270]
    Other proteins in same PDB: d1qopa_
    complexed with ipl, na, plp
26. Domain for 1qoq:
  - Domain d1qoqb_: 1qoq B: [35271]
    Other proteins in same PDB: d1qoqa_
    complexed with igp, plp
27. Domain for 1ttp:
  - Domain d1ttpb_: 1ttp B: [35269]
    Other proteins in same PDB: d1ttpa_
    complexed with cs, plp
28. Domain for 1ttq:
  - Domain d1ttqb_: 1ttq B: [35268]
    Other proteins in same PDB: d1ttqa_
    complexed with k, plp
29. Domain for 1ubs:
  - Domain d1ubsb_: 1ubs B: [35273]
    Other proteins in same PDB: d1ubsa_
    complexed with na, plp, ser; mutant
30. Domain for 2cle:
  - Domain d2cleb1: 2cle B:3-394 [130573]
    Other proteins in same PDB: d2clea1
    automatically matched to d1bksb_
    complexed with f6f, na, plp
31. Domain for 2clh:
  - Domain d2clhb1: 2clh B:3-394 [130575]
    Other proteins in same PDB: d2clha1
    automatically matched to d1bksb_
    complexed with f19, na, plp
32. Domain for 2rhg:
  - Domain d2rhgb_: 2rhg B: [152051]
    Other proteins in same PDB: d2rhga_
    automated match to d2tysb_
    complexed with igp, na, plp
33. Domain for 2trs:
  - Domain d2trsb_: 2trs B: [35277]
    Other proteins in same PDB: d2trsa_
    complexed with ipl, na, pls; mutant
34. Domain for 2tsy:
  - Domain d2tsyb_: 2tsy B: [35283]
    Other proteins in same PDB: d2tsya_
    complexed with g3p, na, pls; mutant
35. Domain for 2tys:
  - Domain d2tysb_: 2tys B: [35272]
    Other proteins in same PDB: d2tysa_
    complexed with na, plt; mutant
36. Domain for 2wsy:
  - Domain d2wsyb_: 2wsy B: [35288]
    Other proteins in same PDB: d2wsya_
    complexed with na, plp
37. Domain for 3cep:
  - Domain d3cepb_: 3cep B: [156533]
    Other proteins in same PDB: d3cepa_
    automated match to d2tysb_
    complexed with cs, g3p, plp
38. Domain for 3pr2:
  - Domain d3pr2b_: 3pr2 B: [183930]
    Other proteins in same PDB: d3pr2a_
    automated match to d1bksb_
    complexed with 7mn, cs, f9f
39. Domain for 4wx2:
  - Domain d4wx2b_: 4wx2 B: [279500]
    Other proteins in same PDB: d4wx2a_
    automated match to d1kfjb_
    complexed with edo, f6f, na, peg, plp
40. Domain for 4xug:
  - Domain d4xugb_: 4xug B: [311951]
    Other proteins in same PDB: d4xuga_
    automated match to d1kfjb_
    complexed with edo, f9f, nh4, plp
41. Domain for 4y6g:
  - Domain d4y6gb_: 4y6g B: [314292]
    Other proteins in same PDB: d4y6ga_
    automated match to d1kfjb_
    complexed with f6f, na, plp
42. Domain for 4zqc:
  - Domain d4zqcb_: 4zqc B: [312368]
    Other proteins in same PDB: d4zqca_
    automated match to d1kfjb_
    complexed with dms, f6f, na, plp
43. Domain for 5bw6:
  - Domain d5bw6b_: 5bw6 B: [312714]
    Other proteins in same PDB: d5bw6a_
    automated match to d1kfjb_
    complexed with f6f, na, plp
44. Domain for 5cgq:
  - Domain d5cgqb_: 5cgq B: [319541]
    Other proteins in same PDB: d5cgqa_
    automated match to d1kfjb_
    complexed with bcn, cs, edo, f9f, plp, trp
45. Domain for 6dz4:
  - Domain d6dz4b_: 6dz4 B: [369724]
    Other proteins in same PDB: d6dz4a_
    automated match to d1kfjb_
    complexed with cl, dms, na, pls
46. Domain for 6dzo:
  - Domain d6dzob_: 6dzo B: [369779]
    Other proteins in same PDB: d6dzoa_
    automated match to d1qoqb_
    complexed with cl, cs, dms, edo, f9f, kou; mutant
47. Domain for 6vnt:
  - Domain d6vntb_: 6vnt B: [400665]
    Other proteins in same PDB: d6vnta_
    automated match to d1kfjb_
    complexed with 0jo, edo, f9f, na, peg
48. Domain for 6wdu:
  - Domain d6wdub_: 6wdu B: [400902]
    Other proteins in same PDB: d6wdua_
    automated match to d1kfjb_
    complexed with dms, edo, kou, na, peg
49. Domain for 6wx3:
  - Domain d6wx3b_: 6wx3 B: [401017]
    Other proteins in same PDB: d6wx3a_
    automated match to d1kfjb_
    complexed with bcn, cl, cs, dms, edo, f9f, plp
50. Domain for 6x0c:
  - Domain d6x0cb_: 6x0c B: [400973]
    Other proteins in same PDB: d6x0ca_
    automated match to d4zqcb_
    complexed with 0jo, bzi, cl, cs, dms, edo, peg; mutant
51. Domain for 6xe3:
  - Domain d6xe3b_: 6xe3 B: [401098]
    Other proteins in same PDB: d6xe3a_
    automated match to d4zqcb_
    complexed with 1d0, cl, cs, dms, edo, f9f; mutant
52. Domain for 6xin:
  - Domain d6xinb_: 6xin B: [407358]
    Other proteins in same PDB: d6xina_
    automated match to d1kfjb_
    complexed with cl, cs, dms, edo, peg, pge, plp, v41
53. Domain for 6xnc:
  - Domain d6xncb_: 6xnc B: [401143]
    Other proteins in same PDB: d6xnca_
    automated match to d1kfjb_
    complexed with 1gp, dms, na, plp, trp
54. Domain for 6xoy:
  - Domain d6xoyb_: 6xoy B: [401261]
    Other proteins in same PDB: d6xoya_
    automated match to d1kfjb_
    complexed with 1gp, dms, na, vb4
55. Domain for 6xrh:
  - Domain d6xrhb_: 6xrh B: [401128]
    Other proteins in same PDB: d6xrha_
    automated match to d1kfjb_
    complexed with 1gp, dms, na, vcp, vcs
56. Domain for 6xt0:
  - Domain d6xt0b_: 6xt0 B: [401183]
    Other proteins in same PDB: d6xt0a_
    automated match to d1kfjb_
    complexed with 1gp, dms, na, ve4, x9d

More info for Protein Tryptophan synthase, beta-subunit from c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes

Timeline for Protein Tryptophan synthase, beta-subunit from c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes:

Protein Tryptophan synthase, beta-subunit from c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes first appeared (with stable ids) in SCOP 1.55
Protein Tryptophan synthase, beta-subunit from c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes appears in SCOPe 2.06
Protein Tryptophan synthase, beta-subunit from c.79.1.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes appears in the current release, SCOPe 2.08