SCOPe 2.07: Protein: Ornithine transcarbamoylase

Lineage for Protein: Ornithine transcarbamoylase

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.78: ATC-like [53670] (2 superfamilies)
consists of two similar domains related by pseudo dyad; duplication
core: 3 layers, a/b/a, parallel beta-sheet of 4 strands, order 2134
Superfamily c.78.1: Aspartate/ornithine carbamoyltransferase [53671] (2 families)
Family c.78.1.1: Aspartate/ornithine carbamoyltransferase [53672] (4 proteins)
Protein Ornithine transcarbamoylase [53676] (6 species)

Species:

Escherichia coli [TaxId:562] [53678] (3 PDB entries)
1. Domains for 1akm:
  1. Domain d1akma1: 1akm A:1-150 [35252]
  2. Domain d1akma2: 1akm A:151-333 [35253]
  3. Domain d1akmb1: 1akm B:1-150 [35254]
  4. Domain d1akmb2: 1akm B:151-333 [35255]
  5. Domain d1akmc1: 1akm C:1-150 [35256]
  6. Domain d1akmc2: 1akm C:151-333 [35257]
2. Domains for 1duv:
  1. Domain d1duvg1: 1duv G:1-150 [35228]
    complexed with mpd, psq
  2. Domain d1duvg2: 1duv G:151-333 [35229]
    complexed with mpd, psq
  3. Domain d1duvh1: 1duv H:1-150 [35230]
    complexed with mpd, psq
  4. Domain d1duvh2: 1duv H:151-333 [35231]
    complexed with mpd, psq
  5. Domain d1duvi1: 1duv I:1-150 [35232]
    complexed with mpd, psq
  6. Domain d1duvi2: 1duv I:151-333 [35233]
    complexed with mpd, psq
3. Domains for 2otc:
  1. Domain d2otca1: 2otc A:1-150 [35234]
    complexed with pao
  2. Domain d2otca2: 2otc A:151-333 [35235]
    complexed with pao
  3. Domain d2otcb1: 2otc B:1-150 [35236]
    complexed with pao
  4. Domain d2otcb2: 2otc B:151-333 [35237]
    complexed with pao
  5. Domain d2otcc1: 2otc C:1-150 [35238]
    complexed with pao
  6. Domain d2otcc2: 2otc C:151-333 [35239]
    complexed with pao
  7. Domain d2otcd1: 2otc D:1-150 [35240]
    complexed with pao
  8. Domain d2otcd2: 2otc D:151-333 [35241]
    complexed with pao
  9. Domain d2otce1: 2otc E:1-150 [35242]
    complexed with pao
  10. Domain d2otce2: 2otc E:151-333 [35243]
    complexed with pao
  11. Domain d2otcf1: 2otc F:1-150 [35244]
    complexed with pao
  12. Domain d2otcf2: 2otc F:151-333 [35245]
    complexed with pao
  13. Domain d2otcg1: 2otc G:1-150 [35246]
    complexed with pao
  14. Domain d2otcg2: 2otc G:151-333 [35247]
    complexed with pao
  15. Domain d2otch1: 2otc H:1-150 [35248]
    complexed with pao
  16. Domain d2otch2: 2otc H:151-333 [35249]
    complexed with pao
  17. Domain d2otci1: 2otc I:1-150 [35250]
    complexed with pao
  18. Domain d2otci2: 2otc I:151-333 [35251]
    complexed with pao
Human (Homo sapiens) [TaxId:9606] [53680] (4 PDB entries)
1. Domains for 1c9y:
  1. Domain d1c9ya1: 1c9y A:34-184 [35262]
    complexed with cp, nva
  2. Domain d1c9ya2: 1c9y A:185-354 [35263]
    complexed with cp, nva
2. Domains for 1ep9:
  1. Domain d1ep9a1: 1ep9 A:35-184 [59484]
    complexed with cp
  2. Domain d1ep9a2: 1ep9 A:185-354 [59485]
    complexed with cp
3. Domains for 1fvo:
  1. Domain d1fvoa1: 1fvo A:34-184 [60042]
    complexed with cp
  2. Domain d1fvoa2: 1fvo A:185-354 [60043]
    complexed with cp
  3. Domain d1fvob1: 1fvo B:34-184 [60044]
    complexed with cp
  4. Domain d1fvob2: 1fvo B:185-354 [60045]
    complexed with cp
4. Domains for 1oth:
  1. Domain d1otha1: 1oth A:34-184 [35260]
    complexed with pao
  2. Domain d1otha2: 1oth A:185-354 [35261]
    complexed with pao
Pseudomonas aeruginosa [TaxId:287] [53677] (2 PDB entries)
1. Domains for 1dxh:
  1. Domain d1dxha1: 1dxh A:1-150 [35202]
    complexed with so4
  2. Domain d1dxha2: 1dxh A:151-335 [35203]
    complexed with so4
2. Domains for 1ort:
  1. Domain d1orta1: 1ort A:1-150 [35204]
  2. Domain d1orta2: 1ort A:151-335 [35205]
  3. Domain d1ortb1: 1ort B:1-150 [35206]
  4. Domain d1ortb2: 1ort B:151-335 [35207]
  5. Domain d1ortc1: 1ort C:1-150 [35208]
  6. Domain d1ortc2: 1ort C:151-335 [35209]
  7. Domain d1ortd1: 1ort D:1-150 [35210]
  8. Domain d1ortd2: 1ort D:151-335 [35211]
  9. Domain d1orte1: 1ort E:1-150 [35212]
  10. Domain d1orte2: 1ort E:151-335 [35213]
  11. Domain d1ortf1: 1ort F:1-150 [35214]
  12. Domain d1ortf2: 1ort F:151-335 [35215]
  13. Domain d1ortg1: 1ort G:1-150 [35216]
  14. Domain d1ortg2: 1ort G:151-335 [35217]
  15. Domain d1orth1: 1ort H:1-150 [35218]
  16. Domain d1orth2: 1ort H:151-335 [35219]
  17. Domain d1orti1: 1ort I:1-150 [35220]
  18. Domain d1orti2: 1ort I:151-335 [35221]
  19. Domain d1ortj1: 1ort J:1-150 [35222]
  20. Domain d1ortj2: 1ort J:151-335 [35223]
  21. Domain d1ortk1: 1ort K:1-150 [35224]
  22. Domain d1ortk2: 1ort K:151-335 [35225]
  23. Domain d1ortl1: 1ort L:1-150 [35226]
  24. Domain d1ortl2: 1ort L:151-335 [35227]
Pyrococcus furiosus [TaxId:2261] [53679] (2 PDB entries)
1. Domains for 1a1s:
  1. Domain d1a1sa1: 1a1s A:1-150 [35258]
  2. Domain d1a1sa2: 1a1s A:151-313 [35259]
2. Domains for 1pvv:
  1. Domain d1pvva1: 1pvv A:1-150 [95190]
    complexed with so4
  2. Domain d1pvva2: 1pvv A:151-313 [95191]
    complexed with so4
Sheep (Ovis aries) [TaxId:9940] [102666] (1 PDB entry)
- Domains for 1fb5:
  1. Domain d1fb5a1: 1fb5 A:35-184 [90492]
    complexed with nva
  2. Domain d1fb5a2: 1fb5 A:185-354 [90493]
    complexed with nva
Thermotoga maritima [TaxId:2336] [110720] (1 PDB entry)
Uniprot P96108
- Domains for 1vlv:
  1. Domain d1vlva1: 1vlv A:1-152 [108866]
    Other proteins in same PDB: d1vlva3
    Structural genomics target
    complexed with po4
  2. Domain d1vlva2: 1vlv A:153-313 [108867]
    Other proteins in same PDB: d1vlva3
    Structural genomics target
    complexed with po4

More info for Protein Ornithine transcarbamoylase from c.78.1.1: Aspartate/ornithine carbamoyltransferase

Timeline for Protein Ornithine transcarbamoylase from c.78.1.1: Aspartate/ornithine carbamoyltransferase:

Protein Ornithine transcarbamoylase from c.78.1.1: Aspartate/ornithine carbamoyltransferase first appeared (with stable ids) in SCOP 1.55
Protein Ornithine transcarbamoylase from c.78.1.1: Aspartate/ornithine carbamoyltransferase appears in SCOPe 2.06
Protein Ornithine transcarbamoylase from c.78.1.1: Aspartate/ornithine carbamoyltransferase appears in the current release, SCOPe 2.08