SCOPe 2.05: Superfamily c.72.2: MurD-like peptide ligases, catalytic domain

Lineage for Superfamily c.72.2: MurD-like peptide ligases, catalytic domain

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.72: Ribokinase-like [53612] (3 superfamilies)
   core: 3 layers: a/b/a; mixed beta-sheet of 8 strands, order 21345678, strand 7 is antiparallel to the rest
   potential superfamily: members of this fold have similar functions but different ATP-binding sites

4. Superfamily c.72.2: MurD-like peptide ligases, catalytic domain [53623] (3 families)
   has extra strand located between strands 1 and 2

Families:

1. c.72.2.1: MurCDEF [53624] (5 proteins)
   automatically mapped to Pfam PF08245

2. c.72.2.2: Folylpolyglutamate synthetase [53629] (1 protein)

3. c.72.2.0: automated matches [254328] (1 protein)
   not a true family

More info for Superfamily c.72.2: MurD-like peptide ligases, catalytic domain

Timeline for Superfamily c.72.2: MurD-like peptide ligases, catalytic domain:

• Superfamily c.72.2: MurD-like peptide ligases, catalytic domain first appeared (with stable ids) in SCOP 1.55
  
• Superfamily c.72.2: MurD-like peptide ligases, catalytic domain appears in SCOPe 2.04
  
• Superfamily c.72.2: MurD-like peptide ligases, catalytic domain appears in SCOPe 2.06
  
• Superfamily c.72.2: MurD-like peptide ligases, catalytic domain appears in the current release, SCOPe 2.08