SCOPe 2.02: Family c.69.1.18: Bacterial lipase

Lineage for Family c.69.1.18: Bacterial lipase

1. Root: SCOPe 2.02

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest

4. Superfamily c.69.1: alpha/beta-Hydrolases [53474] (42 families)
   many members have left-handed crossover connection between strand 8 and additional strand 9

5. Family c.69.1.18: Bacterial lipase [53570] (4 proteins)
   lack the first two strands of the common fold

Proteins:

1. Lipase [53571] (4 species)

   1. Species Burkholderia cepacia, formerly Pseudomonas cepacia [TaxId:292] [63399] (6 PDB entries)

   2. Species Chromobacterium viscosum [TaxId:42739] [53576] (1 PDB entry)

   3. Species Pseudomonas aeruginosa [TaxId:287] [53575] (1 PDB entry)

   4. Species Pseudomonas glumae, also known as Pseudomonas gladioli [TaxId:337] [53572] (2 PDB entries)

2. Lipase A [64145] (1 species)
   minimal alpha/beta hydrolase fold;

   • Species Bacillus subtilis [TaxId:1423] [64146] (11 PDB entries)
     Uniprot P37957 34-212

3. Lipase L1 [75288] (2 species)

   1. Species Bacillus stearothermophilus [TaxId:1422] [75289] (1 PDB entry)

   2. Species Bacillus stearothermophilus, P1 [TaxId:1422] [82512] (1 PDB entry)
      the first thermostable bacterial lipase

4. automated matches [190277] (9 species)
   not a true protein

   1. Species Bacillus sp. [TaxId:294830] [197378] (1 PDB entry)

   2. Species Bacillus sp. [TaxId:307644] [197008] (1 PDB entry)

   3. Species Bacillus subtilis [TaxId:1423] [189733] (1 PDB entry)

   4. Species Bacillus subtilis [TaxId:224308] [196055] (1 PDB entry)

   5. Species Burkholderia cepacia [TaxId:292] [187270] (3 PDB entries)

   6. Species Burkholderia glumae [TaxId:337] [187070] (1 PDB entry)

   7. Species Geobacillus thermocatenulatus [TaxId:33938] [188721] (1 PDB entry)

   8. Species Geobacillus zalihae [TaxId:213419] [187349] (3 PDB entries)

   9. Species Proteus mirabilis [TaxId:584] [193085] (2 PDB entries)

More info for Family c.69.1.18: Bacterial lipase

Timeline for Family c.69.1.18: Bacterial lipase:

• Family c.69.1.18: Bacterial lipase first appeared (with stable ids) in SCOP 1.55
  
• Family c.69.1.18: Bacterial lipase appears in SCOPe 2.01
  
• Family c.69.1.18: Bacterial lipase appears in SCOPe 2.03
  
• Family c.69.1.18: Bacterial lipase appears in the current release, SCOPe 2.08