SCOPe 2.08: Protein: Phosphoribosylpyrophosphate synthetase

Lineage for Protein: Phosphoribosylpyrophosphate synthetase

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.61: PRTase-like [53270] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
Superfamily c.61.1: PRTase-like [53271] (3 families)
Family c.61.1.2: Phosphoribosylpyrophosphate synthetase-like [53296] (2 proteins)
duplication: consists of two domains of this fold
Protein Phosphoribosylpyrophosphate synthetase [53297] (2 species)

Species:

Bacillus subtilis [TaxId:1423] [53298] (3 PDB entries)
1. Domains for 1dkr:
  1. Domain d1dkra1: 1dkr A:8-166 [34114]
    complexed with so4
  2. Domain d1dkra2: 1dkr A:167-316 [34115]
    complexed with so4
  3. Domain d1dkrb1: 1dkr B:1-166 [34116]
    complexed with so4
  4. Domain d1dkrb2: 1dkr B:167-315 [34117]
    complexed with so4
2. Domains for 1dku:
  1. Domain d1dkua1: 1dku A:8-166 [34118]
    complexed with abm, ap2
  2. Domain d1dkua2: 1dku A:167-315 [34119]
    complexed with abm, ap2
  3. Domain d1dkub1: 1dku B:8-166 [34120]
    complexed with abm, ap2
  4. Domain d1dkub2: 1dku B:167-315 [34121]
    complexed with abm, ap2
3. Domains for 1ibs:
  1. Domain d1ibsa1: 1ibs A:8-166 [66107]
    complexed with abm, cd, so4
  2. Domain d1ibsa2: 1ibs A:167-315 [66108]
    complexed with abm, cd, so4
  3. Domain d1ibsb1: 1ibs B:6-166 [66109]
    complexed with abm, cd, so4
  4. Domain d1ibsb2: 1ibs B:167-315 [66110]
    complexed with abm, cd, so4
Methanocaldococcus jannaschii [TaxId:2190] [142562] (2 PDB entries)
Uniprot Q58761 1-155! Uniprot Q58761 156-284
1. Domains for 1u9y:
  1. Domain d1u9ya1: 1u9y A:1-155 [119655]
  2. Domain d1u9ya2: 1u9y A:156-284 [119656]
  3. Domain d1u9yb1: 1u9y B:1-155 [119657]
    automated match to d1u9ya1
  4. Domain d1u9yb2: 1u9y B:156-284 [119658]
    automated match to d1u9ya2
  5. Domain d1u9yc1: 1u9y C:1-155 [119659]
    automated match to d1u9ya1
  6. Domain d1u9yc2: 1u9y C:156-284 [119660]
    automated match to d1u9ya2
  7. Domain d1u9yd1: 1u9y D:1-155 [119661]
    automated match to d1u9ya1
  8. Domain d1u9yd2: 1u9y D:156-284 [119662]
    automated match to d1u9ya2
2. Domains for 1u9z:
  1. Domain d1u9za1: 1u9z A:1-155 [119663]
    automated match to d1u9ya1
    complexed with amp, r5p
  2. Domain d1u9za2: 1u9z A:156-284 [119664]
    automated match to d1u9ya2
    complexed with amp, r5p
  3. Domain d1u9zb1: 1u9z B:1-155 [119665]
    automated match to d1u9ya1
    complexed with amp, r5p
  4. Domain d1u9zb2: 1u9z B:156-284 [119666]
    automated match to d1u9ya2
    complexed with amp, r5p
  5. Domain d1u9zc1: 1u9z C:1-155 [119667]
    automated match to d1u9ya1
    complexed with amp, r5p
  6. Domain d1u9zc2: 1u9z C:156-284 [119668]
    automated match to d1u9ya2
    complexed with amp, r5p
  7. Domain d1u9zd1: 1u9z D:1-155 [119669]
    automated match to d1u9ya1
    complexed with amp, r5p
  8. Domain d1u9zd2: 1u9z D:156-284 [119670]
    automated match to d1u9ya2
    complexed with amp, r5p

More info for Protein Phosphoribosylpyrophosphate synthetase from c.61.1.2: Phosphoribosylpyrophosphate synthetase-like

Timeline for Protein Phosphoribosylpyrophosphate synthetase from c.61.1.2: Phosphoribosylpyrophosphate synthetase-like:

Protein Phosphoribosylpyrophosphate synthetase from c.61.1.2: Phosphoribosylpyrophosphate synthetase-like first appeared (with stable ids) in SCOP 1.55, called Protein Phosphoribosylpyrophosphate synthetase from c.61.1.2: Phosphoribosylpyrophosphate synthetase
Protein Phosphoribosylpyrophosphate synthetase from c.61.1.2: Phosphoribosylpyrophosphate synthetase-like appears in SCOPe 2.07