SCOP 1.73: Protein: Uracil PRTase, Upp

Lineage for Protein: Uracil PRTase, Upp

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
Fold c.61: PRTase-like [53270] (1 superfamily)
core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
Superfamily c.61.1: PRTase-like [53271] (2 families)
Family c.61.1.1: Phosphoribosyltransferases (PRTases) [53272] (15 proteins)
Protein Uracil PRTase, Upp [53293] (5 species)

Species:

Bacillus caldolyticus [TaxId:1394] [75256] (1 PDB entry)
- Domains for 1i5e:
  1. Domain d1i5ea_: 1i5e A: [71116]
  2. Domain d1i5eb_: 1i5e B: [71117]
    complexed with u5p
Sulfolobus solfataricus [TaxId:2287] [142555] (3 PDB entries)
1. Domains for 1xtt:
  1. Domain d1xtta1: 1xtt A:2-216 [122300]
    complexed with acy, u5p
  2. Domain d1xttb1: 1xtt B:2-216 [122301]
    automatically matched to 1XTT A:2-216
    complexed with acy, u5p
  3. Domain d1xttc1: 1xtt C:2-216 [122302]
    automatically matched to 1XTT A:2-216
    complexed with acy, u5p
  4. Domain d1xttd1: 1xtt D:2-216 [122303]
    automatically matched to 1XTT A:2-216
    complexed with acy, u5p
2. Domains for 1xtu:
  1. Domain d1xtua1: 1xtu A:2-216 [122304]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  2. Domain d1xtub1: 1xtu B:2-216 [122305]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  3. Domain d1xtuc1: 1xtu C:2-216 [122306]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  4. Domain d1xtud1: 1xtu D:2-216 [122307]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  5. Domain d1xtue1: 1xtu E:2-216 [122308]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  6. Domain d1xtuf1: 1xtu F:2-216 [122309]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  7. Domain d1xtug1: 1xtu G:2-216 [122310]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
  8. Domain d1xtuh1: 1xtu H:2-216 [122311]
    automatically matched to 1XTT A:2-216
    complexed with ctp, u5p
3. Domains for 1xtv:
  1. Domain d1xtva1: 1xtv A:2-216 [122312]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  2. Domain d1xtvb1: 1xtv B:2-216 [122313]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  3. Domain d1xtvc1: 1xtv C:2-216 [122314]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  4. Domain d1xtvd1: 1xtv D:2-216 [122315]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  5. Domain d1xtve1: 1xtv E:2-216 [122316]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  6. Domain d1xtvf1: 1xtv F:2-216 [122317]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  7. Domain d1xtvg1: 1xtv G:2-216 [122318]
    automatically matched to 1XTT A:2-216
    complexed with u5p
  8. Domain d1xtvh1: 1xtv H:2-216 [122319]
    automatically matched to 1XTT A:2-216
    complexed with u5p
Thermotoga maritima [TaxId:2336] [102538] (1 PDB entry)
TM0721
- Domains for 1o5o:
  1. Domain d1o5oa_: 1o5o A: [92509]
  2. Domain d1o5ob_: 1o5o B: [92510]
  3. Domain d1o5oc_: 1o5o C: [92511]
  4. Domain d1o5od_: 1o5o D: [92512]
    structural genomics
    complexed with so4, u5p
Thermus thermophilus [TaxId:274] [142554] (1 PDB entry)
- Domains for 1v9s:
  1. Domain d1v9sa1: 1v9s A:1-208 [119894]
    complexed with so4
  2. Domain d1v9sb1: 1v9s B:1-208 [119895]
    automatically matched to 1V9S A:1-208
    complexed with so4
  3. Domain d1v9sc1: 1v9s C:1-208 [119896]
    automatically matched to 1V9S A:1-208
    complexed with so4
  4. Domain d1v9sd1: 1v9s D:1-208 [119897]
    automatically matched to 1V9S A:1-208
    complexed with so4
Toxoplasma gondii [TaxId:5811] [53295] (6 PDB entries)
1. Domains for 1bd3:
  1. Domain d1bd3a_: 1bd3 A: [34098]
  2. Domain d1bd3b_: 1bd3 B: [34099]
  3. Domain d1bd3c_: 1bd3 C: [34100]
  4. Domain d1bd3d_: 1bd3 D: [34101]
    complexed with po4; mutant
2. Domains for 1bd4:
  1. Domain d1bd4a_: 1bd4 A: [34106]
  2. Domain d1bd4b_: 1bd4 B: [34107]
  3. Domain d1bd4c_: 1bd4 C: [34108]
  4. Domain d1bd4d_: 1bd4 D: [34109]
    complexed with po4, ura; mutant
3. Domains for 1jlr:
  1. Domain d1jlra_: 1jlr A: [66859]
  2. Domain d1jlrb_: 1jlr B: [66860]
  3. Domain d1jlrc_: 1jlr C: [66861]
  4. Domain d1jlrd_: 1jlr D: [66862]
    complexed with gtp, po4; mutant
4. Domains for 1jls:
  1. Domain d1jlsa_: 1jls A: [66863]
  2. Domain d1jlsb_: 1jls B: [66864]
  3. Domain d1jlsc_: 1jls C: [66865]
  4. Domain d1jlsd_: 1jls D: [66866]
    complexed with mg, po4, prp, ura; mutant
5. Domains for 1upf:
  1. Domain d1upfa_: 1upf A: [34102]
  2. Domain d1upfb_: 1upf B: [34103]
  3. Domain d1upfc_: 1upf C: [34104]
  4. Domain d1upfd_: 1upf D: [34105]
    complexed with so4, urf; mutant
6. Domains for 1upu:
  1. Domain d1upua_: 1upu A: [34110]
  2. Domain d1upub_: 1upu B: [34111]
  3. Domain d1upuc_: 1upu C: [34112]
  4. Domain d1upud_: 1upu D: [34113]
    complexed with po4, u5p; mutant

More info for Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases)

Timeline for Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases):

Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases) first appeared (with stable ids) in SCOP 1.55, called Protein Uracil PRTase from c.61.1.1: Phosphoribosyltransferases (PRTases)
Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases) appears in SCOP 1.71
Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases) appears in SCOP 1.75
Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases) appears in the current release, SCOPe 2.08