Lineage for Protein: Uracil PRTase, Upp

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2128255Fold c.61: PRTase-like [53270] (1 superfamily)
    core: 3 layers, a/b/a; mixed beta-sheet of 6 strands, order 321456; strand 3 is antiparallel to the rest
  4. 2128256Superfamily c.61.1: PRTase-like [53271] (3 families) (S)
  5. 2128257Family c.61.1.1: Phosphoribosyltransferases (PRTases) [53272] (16 protein domains)
  6. 2128512Protein Uracil PRTase, Upp [53293] (5 species)

Species:

  1. 2128513Bacillus caldolyticus [TaxId:1394] [75256] (1 PDB entry)
  2. 2128516Sulfolobus solfataricus [TaxId:2287] [142555] (5 PDB entries)
    Uniprot Q980Q4 2-216
    1. Domain for 1vst:
    2. Domains for 1xtt:
      1. 2128517Domain d1xtta1: 1xtt A:2-216 [122300]
        complexed with acy, u5p
      2. 2128518Domain d1xttb_: 1xtt B: [122301]
        automated match to d1o5oa_
        complexed with acy, u5p
      3. 2128519Domain d1xttc_: 1xtt C: [122302]
        automated match to d1o5oa_
        complexed with acy, u5p
      4. 2128520Domain d1xttd_: 1xtt D: [122303]
        automated match to d1o5oa_
        complexed with acy, u5p
    3. Domains for 1xtu:
      1. 2128529Domain d1xtua_: 1xtu A: [122304]
        automated match to d1o5oa_
        complexed with ctp, u5p
      2. 2128530Domain d1xtub_: 1xtu B: [122305]
        automated match to d1o5oa_
        complexed with ctp, u5p
      3. 2128531Domain d1xtuc_: 1xtu C: [122306]
        automated match to d1o5oa_
        complexed with ctp, u5p
      4. 2128532Domain d1xtud_: 1xtu D: [122307]
        automated match to d1o5oa_
        complexed with ctp, u5p
      5. 2128533Domain d1xtue_: 1xtu E: [122308]
        automated match to d1o5oa_
        complexed with ctp, u5p
      6. 2128534Domain d1xtuf_: 1xtu F: [122309]
        automated match to d1o5oa_
        complexed with ctp, u5p
      7. 2128535Domain d1xtug_: 1xtu G: [122310]
        automated match to d1o5oa_
        complexed with ctp, u5p
      8. 2128536Domain d1xtuh_: 1xtu H: [122311]
        automated match to d1o5oa_
        complexed with ctp, u5p
    4. Domains for 1xtv:
      1. 2128521Domain d1xtva_: 1xtv A: [122312]
        automated match to d1o5oa_
        complexed with u5p
      2. 2128522Domain d1xtvb_: 1xtv B: [122313]
        automated match to d1o5oa_
        complexed with u5p
      3. 2128523Domain d1xtvc_: 1xtv C: [122314]
        automated match to d1o5oa_
        complexed with u5p
      4. 2128524Domain d1xtvd_: 1xtv D: [122315]
        automated match to d1o5oa_
        complexed with u5p
      5. 2128525Domain d1xtve_: 1xtv E: [122316]
        automated match to d1o5oa_
        complexed with u5p
      6. 2128526Domain d1xtvf_: 1xtv F: [122317]
        automated match to d1o5oa_
        complexed with u5p
      7. 2128527Domain d1xtvg_: 1xtv G: [122318]
        automated match to d1o5oa_
        complexed with u5p
      8. 2128528Domain d1xtvh_: 1xtv H: [122319]
        automated match to d1o5oa_
        complexed with u5p
    5. Domains for 3g6w:
      1. 2128537Domain d3g6wa_: 3g6w A: [176396]
        automated match to d1xtta1
        complexed with gtp, hsx, mg, pop, prp
      2. 2128538Domain d3g6wb_: 3g6w B: [176397]
        automated match to d1xtta1
        complexed with gtp, hsx, mg, pop, prp
      3. 2128539Domain d3g6wc_: 3g6w C: [176398]
        automated match to d1xtta1
        complexed with gtp, hsx, mg, pop, prp
      4. 2128540Domain d3g6wd_: 3g6w D: [176399]
        automated match to d1xtta1
        complexed with gtp, hsx, mg, pop, prp
  3. 2128542Thermotoga maritima [TaxId:2336] [102538] (1 PDB entry)
    TM0721
  4. 2128547Thermus thermophilus [TaxId:274] [142554] (1 PDB entry)
    Uniprot Q72J35 1-208
  5. 2128549Toxoplasma gondii [TaxId:5811] [53295] (6 PDB entries)
    1. Domains for 1bd3:
      1. 2128550Domain d1bd3a_: 1bd3 A: [34098]
        complexed with po4; mutant
      2. 2128551Domain d1bd3b_: 1bd3 B: [34099]
        complexed with po4; mutant
      3. 2128552Domain d1bd3c_: 1bd3 C: [34100]
        complexed with po4; mutant
      4. 2128553Domain d1bd3d_: 1bd3 D: [34101]
        complexed with po4; mutant
    2. Domains for 1bd4:
      1. 2128562Domain d1bd4a_: 1bd4 A: [34106]
        complexed with po4, ura
      2. 2128563Domain d1bd4b_: 1bd4 B: [34107]
        complexed with po4, ura
      3. 2128564Domain d1bd4c_: 1bd4 C: [34108]
        complexed with po4, ura
      4. 2128565Domain d1bd4d_: 1bd4 D: [34109]
        complexed with po4, ura
    3. Domains for 1jlr:
      1. 2128558Domain d1jlra_: 1jlr A: [66859]
        complexed with gtp, po4; mutant
      2. 2128559Domain d1jlrb_: 1jlr B: [66860]
        complexed with gtp, po4; mutant
      3. 2128560Domain d1jlrc_: 1jlr C: [66861]
        complexed with gtp, po4; mutant
      4. 2128561Domain d1jlrd_: 1jlr D: [66862]
        complexed with gtp, po4; mutant
    4. Domains for 1jls:
      1. 2128570Domain d1jlsa_: 1jls A: [66863]
        complexed with mg, po4, prp, ura; mutant
      2. 2128571Domain d1jlsb_: 1jls B: [66864]
        complexed with mg, po4, prp, ura; mutant
      3. 2128572Domain d1jlsc_: 1jls C: [66865]
        complexed with mg, po4, prp, ura; mutant
      4. 2128573Domain d1jlsd_: 1jls D: [66866]
        complexed with mg, po4, prp, ura; mutant
    5. Domains for 1upf:
      1. 2128554Domain d1upfa_: 1upf A: [34102]
        complexed with so4, urf; mutant
      2. 2128555Domain d1upfb_: 1upf B: [34103]
        complexed with so4, urf; mutant
      3. 2128556Domain d1upfc_: 1upf C: [34104]
        complexed with so4, urf; mutant
      4. 2128557Domain d1upfd_: 1upf D: [34105]
        complexed with so4, urf; mutant
    6. Domains for 1upu:
      1. 2128566Domain d1upua_: 1upu A: [34110]
        complexed with po4, u5p; mutant
      2. 2128567Domain d1upub_: 1upu B: [34111]
        complexed with po4, u5p; mutant
      3. 2128568Domain d1upuc_: 1upu C: [34112]
        complexed with po4, u5p; mutant
      4. 2128569Domain d1upud_: 1upu D: [34113]
        complexed with po4, u5p; mutant

More info for Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases)

Timeline for Protein Uracil PRTase, Upp from c.61.1.1: Phosphoribosyltransferases (PRTases):