Lineage for Protein: Mitochondrial NAD(P)-dependent malic enzyme

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2127441Fold c.58: Aminoacid dehydrogenase-like, N-terminal domain [53222] (1 superfamily)
    core: 3 layers: a/b/a; parallel beta-sheet of 4 strands; 2134
  4. 2127442Superfamily c.58.1: Aminoacid dehydrogenase-like, N-terminal domain [53223] (6 families) (S)
  5. 2127624Family c.58.1.3: Malic enzyme N-domain [53240] (2 protein domains)
    Pfam PF00390; decorated with additional structures; includes N-terminal additional subdomains and extra N-terminal strand
  6. 2127631Protein Mitochondrial NAD(P)-dependent malic enzyme [53241] (3 species)

Species:

  1. 2127632Domestic pigeon (Columba livia) [TaxId:8932] [75253] (1 PDB entry)
  2. 2127649Human (Homo sapiens) [TaxId:9606] [53242] (10 PDB entries)
    1. Domains for 1do8:
      1. 2127670Domain d1do8a2: 1do8 A:21-279 [33937]
        Other proteins in same PDB: d1do8a1, d1do8b3, d1do8c3, d1do8d3
        complexed with mn, nad, oxl
      2. 2127671Domain d1do8b4: 1do8 B:1021-1279 [197454]
        Other proteins in same PDB: d1do8a1, d1do8b3, d1do8c3, d1do8d3
        complexed with mn, nad, oxl
      3. 2127672Domain d1do8c4: 1do8 C:2021-2279 [197456]
        Other proteins in same PDB: d1do8a1, d1do8b3, d1do8c3, d1do8d3
        complexed with mn, nad, oxl
      4. 2127673Domain d1do8d4: 1do8 D:3021-3279 [197458]
        Other proteins in same PDB: d1do8a1, d1do8b3, d1do8c3, d1do8d3
        complexed with mn, nad, oxl
    2. Domains for 1efk:
      1. 2127680Domain d1efka2: 1efk A:21-279 [33947]
        Other proteins in same PDB: d1efka1, d1efkb1, d1efkc1, d1efkd1
        complexed with mak, mg, nad
      2. 2127681Domain d1efkb2: 1efk B:21-279 [33948]
        Other proteins in same PDB: d1efka1, d1efkb1, d1efkc1, d1efkd1
        complexed with mak, mg, nad
      3. 2127682Domain d1efkc2: 1efk C:21-279 [33949]
        Other proteins in same PDB: d1efka1, d1efkb1, d1efkc1, d1efkd1
        complexed with mak, mg, nad
      4. 2127683Domain d1efkd2: 1efk D:21-279 [33950]
        Other proteins in same PDB: d1efka1, d1efkb1, d1efkc1, d1efkd1
        complexed with mak, mg, nad
    3. Domains for 1efl:
      1. 2127676Domain d1efla2: 1efl A:21-279 [33943]
        Other proteins in same PDB: d1efla1, d1eflb1, d1eflc1, d1efld1
        complexed with mg, nad, ttn
      2. 2127677Domain d1eflb2: 1efl B:21-279 [33944]
        Other proteins in same PDB: d1efla1, d1eflb1, d1eflc1, d1efld1
        complexed with mg, nad, ttn
      3. 2127678Domain d1eflc2: 1efl C:21-279 [33945]
        Other proteins in same PDB: d1efla1, d1eflb1, d1eflc1, d1efld1
        complexed with mg, nad, ttn
      4. 2127679Domain d1efld2: 1efl D:21-279 [33946]
        Other proteins in same PDB: d1efla1, d1eflb1, d1eflc1, d1efld1
        complexed with mg, nad, ttn
    4. Domains for 1gz3:
      1. 2127654Domain d1gz3a2: 1gz3 A:20-279 [83394]
        Other proteins in same PDB: d1gz3a1, d1gz3b1, d1gz3c1, d1gz3d1
        complexed with atp, fum, mn, oxl
      2. 2127655Domain d1gz3b2: 1gz3 B:20-279 [83396]
        Other proteins in same PDB: d1gz3a1, d1gz3b1, d1gz3c1, d1gz3d1
        complexed with atp, fum, mn, oxl
      3. 2127656Domain d1gz3c2: 1gz3 C:20-279 [83398]
        Other proteins in same PDB: d1gz3a1, d1gz3b1, d1gz3c1, d1gz3d1
        complexed with atp, fum, mn, oxl
      4. 2127657Domain d1gz3d2: 1gz3 D:20-279 [83400]
        Other proteins in same PDB: d1gz3a1, d1gz3b1, d1gz3c1, d1gz3d1
        complexed with atp, fum, mn, oxl
    5. Domains for 1gz4:
      1. 2127658Domain d1gz4a2: 1gz4 A:23-279 [70795]
        Other proteins in same PDB: d1gz4a1, d1gz4b1, d1gz4c1, d1gz4d1
        complexed with atp, fum, mn, ttn
      2. 2127659Domain d1gz4b2: 1gz4 B:23-279 [70797]
        Other proteins in same PDB: d1gz4a1, d1gz4b1, d1gz4c1, d1gz4d1
        complexed with atp, fum, mn, ttn
      3. 2127660Domain d1gz4c2: 1gz4 C:23-279 [70799]
        Other proteins in same PDB: d1gz4a1, d1gz4b1, d1gz4c1, d1gz4d1
        complexed with atp, fum, mn, ttn
      4. 2127661Domain d1gz4d2: 1gz4 D:23-279 [70801]
        Other proteins in same PDB: d1gz4a1, d1gz4b1, d1gz4c1, d1gz4d1
        complexed with atp, fum, mn, ttn
    6. Domains for 1pj2:
      1. 2127662Domain d1pj2a2: 1pj2 A:21-279 [94719]
        Other proteins in same PDB: d1pj2a1, d1pj2b1, d1pj2c1, d1pj2d1
        complexed with fum, mlt, mn, nai
      2. 2127663Domain d1pj2b2: 1pj2 B:1021-1279 [94721]
        Other proteins in same PDB: d1pj2a1, d1pj2b1, d1pj2c1, d1pj2d1
        complexed with fum, mlt, mn, nai
      3. 2127664Domain d1pj2c2: 1pj2 C:2021-2279 [94723]
        Other proteins in same PDB: d1pj2a1, d1pj2b1, d1pj2c1, d1pj2d1
        complexed with fum, mlt, mn, nai
      4. 2127665Domain d1pj2d2: 1pj2 D:3021-3279 [94725]
        Other proteins in same PDB: d1pj2a1, d1pj2b1, d1pj2c1, d1pj2d1
        complexed with fum, mlt, mn, nai
    7. Domains for 1pj3:
      1. 2127650Domain d1pj3a2: 1pj3 A:21-279 [94727]
        Other proteins in same PDB: d1pj3a1, d1pj3b1, d1pj3c1, d1pj3d1
        complexed with fum, mn, nad, pyr
      2. 2127651Domain d1pj3b2: 1pj3 B:1021-1279 [94729]
        Other proteins in same PDB: d1pj3a1, d1pj3b1, d1pj3c1, d1pj3d1
        complexed with fum, mn, nad, pyr
      3. 2127652Domain d1pj3c2: 1pj3 C:2021-2279 [94731]
        Other proteins in same PDB: d1pj3a1, d1pj3b1, d1pj3c1, d1pj3d1
        complexed with fum, mn, nad, pyr
      4. 2127653Domain d1pj3d2: 1pj3 D:3021-3279 [94733]
        Other proteins in same PDB: d1pj3a1, d1pj3b1, d1pj3c1, d1pj3d1
        complexed with fum, mn, nad, pyr
    8. Domains for 1pj4:
      1. 2127666Domain d1pj4a2: 1pj4 A:22-279 [94735]
        Other proteins in same PDB: d1pj4a1, d1pj4b1, d1pj4c1, d1pj4d1
        complexed with atp, fum, mlt, mn
      2. 2127667Domain d1pj4b2: 1pj4 B:1022-1279 [94737]
        Other proteins in same PDB: d1pj4a1, d1pj4b1, d1pj4c1, d1pj4d1
        complexed with atp, fum, mlt, mn
      3. 2127668Domain d1pj4c2: 1pj4 C:2022-2279 [94739]
        Other proteins in same PDB: d1pj4a1, d1pj4b1, d1pj4c1, d1pj4d1
        complexed with atp, fum, mlt, mn
      4. 2127669Domain d1pj4d2: 1pj4 D:3022-3279 [94741]
        Other proteins in same PDB: d1pj4a1, d1pj4b1, d1pj4c1, d1pj4d1
        complexed with atp, fum, mlt, mn
    9. Domains for 1pjl:
      1. 2127684Domain d1pjla2: 1pjl A:23-279 [88124]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      2. 2127685Domain d1pjlb2: 1pjl B:1023-1279 [88126]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      3. 2127686Domain d1pjlc2: 1pjl C:2023-2279 [88128]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      4. 2127687Domain d1pjld2: 1pjl D:3023-3279 [88130]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      5. 2127688Domain d1pjle2: 1pjl E:4023-4279 [88132]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      6. 2127689Domain d1pjlf2: 1pjl F:5023-5279 [88134]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      7. 2127690Domain d1pjlg2: 1pjl G:6023-6279 [88136]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
      8. 2127691Domain d1pjlh2: 1pjl H:7023-7279 [88138]
        Other proteins in same PDB: d1pjla1, d1pjlb1, d1pjlc1, d1pjld1, d1pjle1, d1pjlf1, d1pjlg1, d1pjlh1
        complexed with lu, nad
    10. Domains for 1qr6:
      1. 2127674Domain d1qr6a2: 1qr6 A:23-279 [33941]
        Other proteins in same PDB: d1qr6a1, d1qr6b1
        complexed with nad
      2. 2127675Domain d1qr6b2: 1qr6 B:1023-1279 [33942]
        Other proteins in same PDB: d1qr6a1, d1qr6b1
        complexed with nad
  3. 2127692Pig roundworm (Ascaris suum) [TaxId:6253] [75254] (2 PDB entries)
    1. Domains for 1llq:
      1. 2127695Domain d1llqa2: 1llq A:2-295 [74009]
        Other proteins in same PDB: d1llqa1, d1llqb1
        complexed with nad
      2. 2127696Domain d1llqb2: 1llq B:2-295 [74011]
        Other proteins in same PDB: d1llqa1, d1llqb1
        complexed with nad
    2. Domains for 1o0s:
      1. 2127693Domain d1o0sa2: 1o0s A:2-295 [86541]
        Other proteins in same PDB: d1o0sa1, d1o0sb1
        complexed with nai, ttn
      2. 2127694Domain d1o0sb2: 1o0s B:2-295 [86543]
        Other proteins in same PDB: d1o0sa1, d1o0sb1
        complexed with nai, ttn

More info for Protein Mitochondrial NAD(P)-dependent malic enzyme from c.58.1.3: Malic enzyme N-domain

Timeline for Protein Mitochondrial NAD(P)-dependent malic enzyme from c.58.1.3: Malic enzyme N-domain: