SCOPe 2.03: Family c.58.1.1: Aminoacid dehydrogenases

Lineage for Family c.58.1.1: Aminoacid dehydrogenases

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.58: Aminoacid dehydrogenase-like, N-terminal domain [53222] (1 superfamily)
   core: 3 layers: a/b/a; parallel beta-sheet of 4 strands; 2134

4. Superfamily c.58.1: Aminoacid dehydrogenase-like, N-terminal domain [53223] (6 families)

5. Family c.58.1.1: Aminoacid dehydrogenases [53224] (4 proteins)
   dimerisation domain; contains additional structures including two extra N-terminal strands in the beta-sheet

Proteins:

1. Glutamate dehydrogenase [53225] (8 species)

   1. Species Clostridium symbiosum [TaxId:1512] [53226] (4 PDB entries)

   2. Species Cow (Bos taurus) [TaxId:9913] [53230] (6 PDB entries)

   3. Species Human (Homo sapiens) [TaxId:9606] [75252] (2 PDB entries)

   4. Species Pyrobaculum islandicum [TaxId:2277] [117471] (1 PDB entry)
      Uniprot Q9Y8I4

   5. Species Pyrococcus furiosus [TaxId:2261] [53227] (1 PDB entry)

   6. Species Thermococcus litoralis [TaxId:2265] [53228] (1 PDB entry)

   7. Species Thermococcus profundus [TaxId:49899] [64106] (1 PDB entry)

   8. Species Thermotoga maritima [TaxId:2336] [53229] (3 PDB entries)

2. Leucine dehydrogenase [53231] (1 species)

   • Species Bacillus sphaericus [TaxId:1421] [53232] (1 PDB entry)

3. Phenylalanine dehydrogenase [53233] (1 species)

   • Species Rhodococcus sp., M4 [TaxId:1831] [53234] (4 PDB entries)

4. automated matches [227004] (2 species)
   not a true protein

   1. Species Clostridium symbiosum, [TaxId:1512] [231613] (1 PDB entry)

   2. Species Cow (Bos taurus) [TaxId:9913] [225673] (2 PDB entries)

More info for Family c.58.1.1: Aminoacid dehydrogenases

Timeline for Family c.58.1.1: Aminoacid dehydrogenases:

• Family c.58.1.1: Aminoacid dehydrogenases first appeared (with stable ids) in SCOP 1.55
  
• Family c.58.1.1: Aminoacid dehydrogenases appears in SCOPe 2.02
  
• Family c.58.1.1: Aminoacid dehydrogenases appears in SCOPe 2.04
  
• Family c.58.1.1: Aminoacid dehydrogenases appears in the current release, SCOPe 2.08