SCOPe 2.08: Family c.56.6.1: LigB-like

Lineage for Family c.56.6.1: LigB-like

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
   core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

4. Superfamily c.56.6: LigB-like [53213] (1 family)
   circular permutation of the common fold, most similar to the PNP fold
   automatically mapped to Pfam PF02900

5. Family c.56.6.1: LigB-like [53214] (2 proteins)

Proteins:

1. LigB subunit of an aromatic-ring-opening dioxygenase LigAB [53215] (1 species)

   • Species Pseudomonas paucimobilis [TaxId:13689] [53216] (2 PDB entries)

2. Uncharacterized protein YgiD [159657] (1 species)

   • Species Escherichia coli [TaxId:562] [159658] (1 PDB entry)
     Uniprot P24197 14-271

More info for Family c.56.6.1: LigB-like

Timeline for Family c.56.6.1: LigB-like:

• Family c.56.6.1: LigB-like first appeared (with stable ids) in SCOP 1.55, called Family c.56.6.1: LigB subunit of an aromatic-ring-opening dioxygenase LigAB
  
• Family c.56.6.1: LigB-like appears in SCOPe 2.07