Lineage for Family c.56.5.4: Bacterial dinuclear zinc exopeptidases

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2125386Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2126724Superfamily c.56.5: Zn-dependent exopeptidases [53187] (10 families) (S)
    core: mixed beta-sheet of 8 strands, order 12435867; strands 2, 6 & 7 are antiparallel to the rest
  5. 2126919Family c.56.5.4: Bacterial dinuclear zinc exopeptidases [53204] (18 protein domains)

Protein Domains:

  1. 2126920Allantoate amidohydrolase AllC catalytic domain [142514] (1 species)
  2. 2126926Aminoacylase-1, catalytic domain [102511] (1 species)
  3. 2126930Aminopeptidase [53205] (2 species)
    1. 2126931Species Aeromonas proteolytica [TaxId:671] [53206] (17 PDB entries)
      Uniprot Q01693
      synonym: Vibrio proteolyticus
    2. 2126949Species Streptomyces griseus [TaxId:1911] [53207] (5 PDB entries)
  4. 2126955Aminopeptidase PepV [82450] (1 species)
    unspecific amino dipeptidase
  5. 2126958Aminopeptidase YpdE [142520] (1 species)
  6. 2126966Carboxypeptidase G2, catalytic domain [53208] (1 species)
  7. 2126972Deblocking aminopeptidase YhfE [142512] (1 species)
    contains insert beta-barrel domain
  8. 2126990Endoglucanase TM1049 [142516] (1 species)
  9. 2126993Frv operon protein FrvX, catalytic domain [117659] (1 species)
  10. 2127001Hypothetical protein YsdC, catalytic domain [102513] (1 species)
    contains insert beta-barrel domain
  11. 2127004IAA-amino acid hydrolase, catalytic domain [117663] (1 species)
  12. 2127008Peptidase T (tripeptidase), catalytic domain [75250] (2 species)
    1. 2127009Species Escherichia coli [TaxId:562] [102506] (1 PDB entry)
    2. 2127012Species Salmonella typhimurium [TaxId:90371] [75251] (1 PDB entry)
  13. 2127014Peptidase-like beta-alanine synthase, catalytic domain [102507] (1 species)
  14. 2127026Probable aminopeptidase ApeA [117661] (1 species)
    contains insert beta-barrel domain
  15. 2127029Protein YxeP [142518] (1 species)
  16. 2127033Putative endoglucanase TM1048, catalytic domain [102515] (1 species)
    contains insert beta-barrel domain
  17. 2127036Succinyl-diaminopimelate desuccinylase, catalytic domain [102509] (1 species)
  18. 2127040automated matches [190049] (2 species)
    not a true protein
    1. 2127041Species Streptomyces griseus [TaxId:1911] [186770] (6 PDB entries)
    2. 2127048Species Vibrio proteolyticus [TaxId:671] [186859] (5 PDB entries)

More info for Family c.56.5.4: Bacterial dinuclear zinc exopeptidases

Timeline for Family c.56.5.4: Bacterial dinuclear zinc exopeptidases: