SCOP 1.73: Protein: Uridine phosphorylase

Lineage for Protein: Uridine phosphorylase

Root: SCOP 1.73
Class c: Alpha and beta proteins (a/b) [51349] (141 folds)
Fold c.56: Phosphorylase/hydrolase-like [53162] (7 superfamilies)
core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Superfamily c.56.2: Purine and uridine phosphorylases [53167] (1 family)

complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

Family c.56.2.1: Purine and uridine phosphorylases [53168] (6 proteins)
Protein Uridine phosphorylase [53176] (2 species)

Species:

Escherichia coli [TaxId:562] [53177] (13 PDB entries)
also includes the PDB entry (1rxs) where protein chains are designated by both upper case and lower case letters creating problems with its processing and presentation in SCOP

Domains for 1k3f:
1. Domain d1k3fa_: 1k3f A: [68105]
2. Domain d1k3fb_: 1k3f B: [68106]
3. Domain d1k3fc_: 1k3f C: [68107]
4. Domain d1k3fd_: 1k3f D: [68108]
5. Domain d1k3fe_: 1k3f E: [68109]
6. Domain d1k3ff_: 1k3f F: [68110]
Domains for 1lx7:
1. Domain d1lx7a_: 1lx7 A: [74329]
2. Domain d1lx7b_: 1lx7 B: [74330]
  complexed with mse
Domains for 1rxc:
1. Domain d1rxca_: 1rxc A: [98015]
2. Domain d1rxcb_: 1rxc B: [98016]
3. Domain d1rxcc_: 1rxc C: [98017]
4. Domain d1rxcd_: 1rxc D: [98018]
5. Domain d1rxce_: 1rxc E: [98019]
6. Domain d1rxcf_: 1rxc F: [98020]
7. Domain d1rxcg_: 1rxc G: [98021]
8. Domain d1rxch_: 1rxc H: [98022]
9. Domain d1rxci_: 1rxc I: [98023]
10. Domain d1rxcj_: 1rxc J: [98024]
11. Domain d1rxck_: 1rxc K: [98025]
12. Domain d1rxcl_: 1rxc L: [98026]
  complexed with 5ud, k, po4, r1p, urf
Domains for 1rxu:
1. Domain d1rxua_: 1rxu A: [98037]
2. Domain d1rxub_: 1rxu B: [98038]
3. Domain d1rxuc_: 1rxu C: [98039]
4. Domain d1rxud_: 1rxu D: [98040]
5. Domain d1rxue_: 1rxu E: [98041]
6. Domain d1rxuf_: 1rxu F: [98042]
7. Domain d1rxug_: 1rxu G: [98043]
8. Domain d1rxuh_: 1rxu H: [98044]
9. Domain d1rxui_: 1rxu I: [98045]
10. Domain d1rxuj_: 1rxu J: [98046]
11. Domain d1rxuk_: 1rxu K: [98047]
12. Domain d1rxul_: 1rxu L: [98048]
13. Domain d1rxum_: 1rxu M: [98049]
14. Domain d1rxun_: 1rxu N: [98050]
15. Domain d1rxuo_: 1rxu O: [98051]
16. Domain d1rxup_: 1rxu P: [98052]
17. Domain d1rxuq_: 1rxu Q: [98053]
18. Domain d1rxur_: 1rxu R: [98054]
  complexed with k, po4, thm
Domains for 1rxy:
1. Domain d1rxya_: 1rxy A: [98065]
2. Domain d1rxyb_: 1rxy B: [98066]
  complexed with act, gol, k, so4
Domains for 1t0u:
1. Domain d1t0ua_: 1t0u A: [99064]
2. Domain d1t0ub_: 1t0u B: [99065]
Domains for 1tgv:
1. Domain d1tgva1: 1tgv A:4-253 [119247]
  automatically matched to d1k3fa_
  complexed with 5ud, k, so4
2. Domain d1tgvb1: 1tgv B:4-253 [119248]
  automatically matched to d1k3fa_
  complexed with 5ud, k, so4
Domains for 1tgy:
1. Domain d1tgya1: 1tgy A:4-253 [119249]
  automatically matched to d1k3fa_
  complexed with k, r1p, ura
2. Domain d1tgyb1: 1tgy B:4-253 [119250]
  automatically matched to d1k3fa_
  complexed with k, r1p, ura
Domains for 1u1c:
1. Domain d1u1ca1: 1u1c A:4-253 [119421]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
2. Domain d1u1cb1: 1u1c B:4-253 [119422]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
3. Domain d1u1cc1: 1u1c C:4-253 [119423]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
4. Domain d1u1cd1: 1u1c D:4-253 [119424]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
5. Domain d1u1ce1: 1u1c E:4-253 [119425]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
6. Domain d1u1cf1: 1u1c F:4-253 [119426]
  automatically matched to d1k3fa_
  complexed with bau, k, po4
Domains for 1u1d:
1. Domain d1u1da1: 1u1d A:4-253 [119427]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
2. Domain d1u1db1: 1u1d B:4-253 [119428]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
3. Domain d1u1dc1: 1u1d C:4-253 [119429]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
4. Domain d1u1dd1: 1u1d D:4-253 [119430]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
5. Domain d1u1de1: 1u1d E:4-253 [119431]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
6. Domain d1u1df1: 1u1d F:4-253 [119432]
  automatically matched to d1k3fa_
  complexed with 181, k, po4
Domains for 1u1e:
1. Domain d1u1ea1: 1u1e A:4-253 [119433]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
2. Domain d1u1eb1: 1u1e B:4-253 [119434]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
3. Domain d1u1ec1: 1u1e C:4-253 [119435]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
4. Domain d1u1ed1: 1u1e D:4-253 [119436]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
5. Domain d1u1ee1: 1u1e E:4-253 [119437]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
6. Domain d1u1ef1: 1u1e F:4-253 [119438]
  automatically matched to d1k3fa_
  complexed with 182, k, po4
Domains for 1u1f:
1. Domain d1u1fa1: 1u1f A:4-253 [119439]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
2. Domain d1u1fb1: 1u1f B:4-253 [119440]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
3. Domain d1u1fc1: 1u1f C:4-253 [119441]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
4. Domain d1u1fd1: 1u1f D:4-253 [119442]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
5. Domain d1u1fe1: 1u1f E:4-253 [119443]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
6. Domain d1u1ff1: 1u1f F:4-253 [119444]
  automatically matched to d1k3fa_
  complexed with 183, k, po4
Domains for 1u1g:
1. Domain d1u1ga1: 1u1g A:4-253 [119445]
  automatically matched to d1k3fa_
  complexed with bbb, k
2. Domain d1u1gb1: 1u1g B:4-253 [119446]
  automatically matched to d1k3fa_
  complexed with bbb, k
3. Domain d1u1gc1: 1u1g C:4-253 [119447]
  automatically matched to d1k3fa_
  complexed with bbb, k
4. Domain d1u1gd1: 1u1g D:4-253 [119448]
  automatically matched to d1k3fa_
  complexed with bbb, k
5. Domain d1u1ge1: 1u1g E:4-253 [119449]
  automatically matched to d1k3fa_
  complexed with bbb, k
6. Domain d1u1gf1: 1u1g F:4-253 [119450]
  automatically matched to d1k3fa_
  complexed with bbb, k

Salmonella typhimurium [TaxId:90371] [117656] (1 PDB entry)
- Domains for 1ryz:
  1. Domain d1ryza_: 1ryz A: [111975]
  2. Domain d1ryzb_: 1ryz B: [111976]
  3. Domain d1ryzc_: 1ryz C: [111977]
  4. Domain d1ryzd_: 1ryz D: [111978]
  5. Domain d1ryze_: 1ryz E: [111979]
  6. Domain d1ryzf_: 1ryz F: [111980]
    complexed with acy

More info for Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases

Timeline for Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases:

Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases first appeared (with stable ids) in SCOP 1.55
Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases appears in SCOP 1.71
Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases appears in SCOP 1.75
Protein Uridine phosphorylase from c.56.2.1: Purine and uridine phosphorylases appears in the current release, SCOPe 2.08