SCOP 1.71: Protein: Purine nucleoside phosphorylase, PNP

Lineage for Protein: Purine nucleoside phosphorylase, PNP

Root: SCOP 1.71
Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
Fold c.56: Phosphorylase/hydrolase-like [53162] (6 superfamilies)
core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops

Superfamily c.56.2: Purine and uridine phosphorylases [53167] (1 family)

complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8

Family c.56.2.1: Purine and uridine phosphorylases [53168] (6 proteins)
Protein Purine nucleoside phosphorylase, PNP [53169] (9 species)

Species:

Bacillus anthracis [TaxId:1392] [117655] (1 PDB entry)
- Domains for 1xe3:
  1. Domain d1xe3a_: 1xe3 A: [115207]
  2. Domain d1xe3b_: 1xe3 B: [115208]
  3. Domain d1xe3c_: 1xe3 C: [115209]
  4. Domain d1xe3d_: 1xe3 D: [115210]
  5. Domain d1xe3e_: 1xe3 E: [115211]
  6. Domain d1xe3f_: 1xe3 F: [115212]
    complexed with cl
Cellulomonas sp. [TaxId:40001] [53173] (2 PDB entries)
1. Domains for 1c3x:
  1. Domain d1c3xa_: 1c3x A: [33787]
  2. Domain d1c3xb_: 1c3x B: [33788]
  3. Domain d1c3xc_: 1c3x C: [33789]
2. Domains for 1qe5:
  1. Domain d1qe5a_: 1qe5 A: [33784]
  2. Domain d1qe5b_: 1qe5 B: [33785]
  3. Domain d1qe5c_: 1qe5 C: [33786]
Cow (Bos taurus) [TaxId:9913] [53171] (16 PDB entries)
1. Domain for 1a9o:
  - Domain d1a9o__: 1a9o - [33770]
    complexed with po4
2. Domain for 1a9p:
  - Domain d1a9p__: 1a9p - [33774]
    complexed with 9di, po4
3. Domain for 1a9q:
  - Domain d1a9q__: 1a9q - [33769]
    complexed with hpa, so4
4. Domain for 1a9r:
  - Domain d1a9r__: 1a9r - [33767]
    complexed with hpa, so4
5. Domain for 1a9s:
  - Domain d1a9s__: 1a9s - [33768]
    complexed with nos, so4
6. Domain for 1a9t:
  - Domain d1a9t__: 1a9t - [33765]
    complexed with hpa, r1p
7. Domain for 1b8n:
  - Domain d1b8na_: 1b8n A: [33766]
    complexed with img, mg, po4
8. Domain for 1b8o:
  - Domain d1b8oa_: 1b8o A: [33762]
    complexed with imh, mg, po4
9. Domain for 1fxu:
  - Domain d1fxua_: 1fxu A: [33772]
    complexed with gu7, mg, po4, zn
10. Domains for 1lv8:
  1. Domain d1lv8a_: 1lv8 A: [91132]
  2. Domain d1lv8b_: 1lv8 B: [91133]
  3. Domain d1lv8c_: 1lv8 C: [91134]
  4. Domain d1lv8d_: 1lv8 D: [91135]
  5. Domain d1lv8e_: 1lv8 E: [91136]
  6. Domain d1lv8f_: 1lv8 F: [91137]
    complexed with 9pp, ca
11. Domains for 1lvu:
  1. Domain d1lvua_: 1lvu A: [91146]
  2. Domain d1lvub_: 1lvu B: [91147]
  3. Domain d1lvuc_: 1lvu C: [91148]
  4. Domain d1lvud_: 1lvu D: [91149]
  5. Domain d1lvue_: 1lvu E: [91150]
  6. Domain d1lvuf_: 1lvu F: [91151]
    complexed with 9pp, ca
12. Domain for 1pbn:
  - Domain d1pbn__: 1pbn - [33771]
13. Domain for 1v48:
  - Domain d1v48a_: 1v48 A: [108349]
    complexed with ha1, mg, zn
14. Domain for 1vfn:
  - Domain d1vfn__: 1vfn - [33773]
    complexed with hpa, mg, zn
15. Domain for 3pnp:
  - Domain d3pnp__: 3pnp - [33763]
    complexed with mg, po4
16. Domain for 4pnp:
  - Domain d4pnp__: 4pnp - [33764]
    complexed with po4
Escherichia coli [TaxId:562] [53172] (19 PDB entries)
1. Domains for 1a69:
  1. Domain d1a69a_: 1a69 A: [33781]
  2. Domain d1a69b_: 1a69 B: [33782]
  3. Domain d1a69c_: 1a69 C: [33783]
    complexed with fmb, so4
2. Domains for 1ecp:
  1. Domain d1ecpa_: 1ecp A: [33775]
  2. Domain d1ecpb_: 1ecp B: [33776]
  3. Domain d1ecpc_: 1ecp C: [33777]
  4. Domain d1ecpd_: 1ecp D: [33778]
  5. Domain d1ecpe_: 1ecp E: [33779]
  6. Domain d1ecpf_: 1ecp F: [33780]
3. Domains for 1k9s:
  1. Domain d1k9sa_: 1k9s A: [68359]
  2. Domain d1k9sb_: 1k9s B: [68360]
  3. Domain d1k9sc_: 1k9s C: [68361]
  4. Domain d1k9sd_: 1k9s D: [68362]
  5. Domain d1k9se_: 1k9s E: [68363]
  6. Domain d1k9sf_: 1k9s F: [68364]
    complexed with fm1, fm2, po4
4. Domains for 1otx:
  1. Domain d1otxa_: 1otx A: [93530]
  2. Domain d1otxb_: 1otx B: [93531]
  3. Domain d1otxc_: 1otx C: [93532]
    complexed with po4; mutant
5. Domains for 1oty:
  1. Domain d1otya_: 1oty A: [93533]
  2. Domain d1otyb_: 1oty B: [93534]
  3. Domain d1otyc_: 1oty C: [93535]
    complexed with 6mp, po4
6. Domains for 1ou4:
  1. Domain d1ou4a_: 1ou4 A: [93540]
  2. Domain d1ou4b_: 1ou4 B: [93541]
  3. Domain d1ou4c_: 1ou4 C: [93542]
    complexed with 6mp, po4
7. Domains for 1oum:
  1. Domain d1ouma_: 1oum A: [93551]
  2. Domain d1oumb_: 1oum B: [93552]
  3. Domain d1oumc_: 1oum C: [93553]
    complexed with po4, tal; mutant
8. Domains for 1ov6:
  1. Domain d1ov6a_: 1ov6 A: [93583]
  2. Domain d1ov6b_: 1ov6 B: [93584]
  3. Domain d1ov6c_: 1ov6 C: [93585]
    complexed with dbm, po4; mutant
9. Domains for 1ovg:
  1. Domain d1ovga_: 1ovg A: [93596]
  2. Domain d1ovgb_: 1ovg B: [93597]
  3. Domain d1ovgc_: 1ovg C: [93598]
    complexed with mdr, po4; mutant
10. Domains for 1pk7:
  1. Domain d1pk7a_: 1pk7 A: [94804]
  2. Domain d1pk7b_: 1pk7 B: [94805]
  3. Domain d1pk7c_: 1pk7 C: [94806]
    complexed with adn, po4
11. Domains for 1pk9:
  1. Domain d1pk9a_: 1pk9 A: [94823]
  2. Domain d1pk9b_: 1pk9 B: [94824]
  3. Domain d1pk9c_: 1pk9 C: [94825]
    complexed with 2fa, po4
12. Domains for 1pke:
  1. Domain d1pkea_: 1pke A: [94826]
  2. Domain d1pkeb_: 1pke B: [94827]
  3. Domain d1pkec_: 1pke C: [94828]
    complexed with 2fd, po4
13. Domains for 1pr0:
  1. Domain d1pr0a_: 1pr0 A: [95042]
  2. Domain d1pr0b_: 1pr0 B: [95043]
  3. Domain d1pr0c_: 1pr0 C: [95044]
    complexed with nos, po4
14. Domains for 1pr1:
  1. Domain d1pr1a_: 1pr1 A: [95045]
  2. Domain d1pr1b_: 1pr1 B: [95046]
  3. Domain d1pr1c_: 1pr1 C: [95047]
    complexed with fmb, po4
15. Domains for 1pr2:
  1. Domain d1pr2a_: 1pr2 A: [95048]
  2. Domain d1pr2b_: 1pr2 B: [95049]
  3. Domain d1pr2c_: 1pr2 C: [95050]
    complexed with mdr, po4
16. Domains for 1pr4:
  1. Domain d1pr4a_: 1pr4 A: [95051]
  2. Domain d1pr4b_: 1pr4 B: [95052]
  3. Domain d1pr4c_: 1pr4 C: [95053]
    complexed with mtp, po4
17. Domains for 1pr5:
  1. Domain d1pr5a_: 1pr5 A: [95054]
  2. Domain d1pr5b_: 1pr5 B: [95055]
  3. Domain d1pr5c_: 1pr5 C: [95056]
    complexed with po4, tbn
18. Domains for 1pr6:
  1. Domain d1pr6a_: 1pr6 A: [95057]
  2. Domain d1pr6b_: 1pr6 B: [95058]
  3. Domain d1pr6c_: 1pr6 C: [95059]
    complexed with po4, xya
19. Domains for 1pw7:
  1. Domain d1pw7a_: 1pw7 A: [95202]
  2. Domain d1pw7b_: 1pw7 B: [95203]
  3. Domain d1pw7c_: 1pw7 C: [95204]
    complexed with po4, rab
Human (Homo sapiens) [TaxId:9606] [53170] (11 PDB entries)
1. Domain for 1m73:
  - Domain d1m73e_: 1m73 E: [91211]
    complexed with so4
2. Domain for 1pf7:
  - Domain d1pf7e_: 1pf7 E: [104142]
    complexed with imh, so4
3. Domain for 1pwy:
  - Domain d1pwye_: 1pwy E: [95266]
    complexed with ac2, so4
4. Domain for 1rct:
  - Domain d1rcte_: 1rct E: [97294]
    complexed with nos, so4
5. Domain for 1rfg:
  - Domain d1rfge_: 1rfg E: [111797]
    complexed with gmp, so4
6. Domain for 1ula:
  - Domain d1ula__: 1ula - [33761]
7. Domain for 1ulb:
  - Domain d1ulb__: 1ulb - [33760]
    complexed with gun, so4
8. Domain for 1v2h:
  - Domain d1v2he_: 1v2h E: [100271]
    complexed with gun, so4
9. Domain for 1v3q:
  - Domain d1v3qe_: 1v3q E: [100290]
    complexed with 2di, so4
10. Domain for 1v41:
  - Domain d1v41e_: 1v41 E: [113520]
    complexed with azg, so4
11. Domain for 1v45:
  - Domain d1v45e_: 1v45 E: [113524]
    complexed with 3dg, so4
Mycobacterium tuberculosis [TaxId:1773] [64098] (3 PDB entries)
1. Domains for 1g2o:
  1. Domain d1g2oa_: 1g2o A: [60228]
  2. Domain d1g2ob_: 1g2o B: [60229]
  3. Domain d1g2oc_: 1g2o C: [60230]
    complexed with imh, po4
2. Domains for 1i80:
  1. Domain d1i80a_: 1i80 A: [61927]
  2. Domain d1i80b_: 1i80 B: [61928]
  3. Domain d1i80c_: 1i80 C: [61929]
    complexed with 9hx, imr, po4
3. Domains for 1n3i:
  1. Domain d1n3ia_: 1n3i A: [91565]
  2. Domain d1n3ib_: 1n3i B: [91566]
  3. Domain d1n3ic_: 1n3i C: [91567]
    complexed with dih, po4
Thermotoga maritima [TaxId:243274] [117654] (1 PDB entry)
- Domains for 1vmk:
  1. Domain d1vmka_: 1vmk A: [113680]
  2. Domain d1vmkb_: 1vmk B: [113681]
  3. Domain d1vmkc_: 1vmk C: [113682]
    Structural genomics target
    complexed with gun, mg
Thermus thermophilus [TaxId:274] [89721] (4 PDB entries)
1. Domains for 1odi:
  1. Domain d1odia_: 1odi A: [86851]
  2. Domain d1odib_: 1odi B: [86852]
  3. Domain d1odic_: 1odi C: [86853]
  4. Domain d1odid_: 1odi D: [86854]
  5. Domain d1odie_: 1odi E: [86855]
  6. Domain d1odif_: 1odi F: [86856]
    complexed with adn, so4
2. Domains for 1odj:
  1. Domain d1odja_: 1odj A: [86857]
  2. Domain d1odjb_: 1odj B: [86858]
  3. Domain d1odjc_: 1odj C: [86859]
  4. Domain d1odjd_: 1odj D: [86860]
  5. Domain d1odje_: 1odj E: [86861]
  6. Domain d1odjf_: 1odj F: [86862]
    complexed with gmp, so4
3. Domains for 1odk:
  1. Domain d1odka_: 1odk A: [86863]
  2. Domain d1odkb_: 1odk B: [86864]
  3. Domain d1odkc_: 1odk C: [86865]
  4. Domain d1odkd_: 1odk D: [86866]
  5. Domain d1odke_: 1odk E: [86867]
  6. Domain d1odkf_: 1odk F: [86868]
    complexed with gol
4. Domains for 1odl:
  1. Domain d1odla_: 1odl A: [86869]
  2. Domain d1odlb_: 1odl B: [86870]
  3. Domain d1odlc_: 1odl C: [86871]
  4. Domain d1odld_: 1odl D: [86872]
  5. Domain d1odle_: 1odl E: [86873]
  6. Domain d1odlf_: 1odl F: [86874]
    complexed with cl, gol, so4
Vibrio cholerae [TaxId:666] [102499] (2 PDB entries)
1. Domains for 1vhj:
  1. Domain d1vhja_: 1vhj A: [100674]
  2. Domain d1vhjb_: 1vhj B: [100675]
  3. Domain d1vhjc_: 1vhj C: [100676]
  4. Domain d1vhjd_: 1vhj D: [100677]
  5. Domain d1vhje_: 1vhj E: [100678]
  6. Domain d1vhjf_: 1vhj F: [100679]
    structural genomics
2. Domains for 1vhw:
  1. Domain d1vhwa_: 1vhw A: [100706]
  2. Domain d1vhwb_: 1vhw B: [100707]
  3. Domain d1vhwc_: 1vhw C: [100708]
  4. Domain d1vhwd_: 1vhw D: [100709]
  5. Domain d1vhwe_: 1vhw E: [100710]
  6. Domain d1vhwf_: 1vhw F: [100711]
    structural genomics
    complexed with adn

More info for Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases

Timeline for Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases:

Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases first appeared (with stable ids) in SCOP 1.55
Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases appears in SCOP 1.69
Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases appears in SCOP 1.73
Protein Purine nucleoside phosphorylase, PNP from c.56.2.1: Purine and uridine phosphorylases appears in the current release, SCOPe 2.08