Lineage for Species: Thermus aquaticus [TaxId: 271]
- Root: SCOPe 2.04
Class c: Alpha and beta proteins (a/b) [51349] (148 folds) 
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the restSuperfamily c.55.3: Ribonuclease H-like [53098] (15 families) 
consists of one domain of this fold
Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (16 proteins)
contains Pfam PF00929
Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
part of Klenow fragment, KF
Species Thermus aquaticus [TaxId:271] [53121] (24 PDB entries)
PDB entries in Species: Thermus aquaticus [TaxId: 271]:
- Domain(s) for 1bgx:
- Domain(s) for 1jxe:
Domain d1jxea1: 1jxe A:293-422 [33705]
Other proteins in same PDB: d1jxea2
- Domain(s) for 1ktq:
Domain d1ktqa1: 1ktq A:290-422 [33703]
Other proteins in same PDB: d1ktqa2
- Domain(s) for 1qss:
Domain d1qssa1: 1qss A:293-422 [33697]
Other proteins in same PDB: d1qssa2
protein/DNA complex; complexed with dg3, mg
- Domain(s) for 1qsy:
Domain d1qsya1: 1qsy A:293-422 [33700]
Other proteins in same PDB: d1qsya2
protein/DNA complex; complexed with dds, mg
- Domain(s) for 1qtm:
Domain d1qtma1: 1qtm A:293-422 [33695]
Other proteins in same PDB: d1qtma2
protein/DNA complex; complexed with mg, ttp
- Domain(s) for 1taq:
Domain d1taqa3: 1taq A:290-422 [33698]
Other proteins in same PDB: d1taqa1, d1taqa2, d1taqa4
complexed with bgl, zn
- Domain(s) for 1tau:
Domain d1taua3: 1tau A:290-422 [33707]
Other proteins in same PDB: d1taua1, d1taua2, d1taua4
protein/DNA complex; complexed with bgl, zn
- Domain(s) for 2ktq:
Domain d2ktqa1: 2ktq A:295-422 [33702]
Other proteins in same PDB: d2ktqa2
protein/DNA complex; complexed with dct, mg
- Domain(s) for 3ktq:
Domain d3ktqa1: 3ktq A:293-422 [33696]
Other proteins in same PDB: d3ktqa2
protein/DNA complex; complexed with dct, mg
- Domain(s) for 3m8r:
Domain d3m8ra1: 3m8r A:294-422 [213153]
Other proteins in same PDB: d3m8ra2
automated match to d1jxea1
protein/DNA complex; complexed with 15p, act, gol, hxz, mg
- Domain(s) for 3m8s:
Domain d3m8sa1: 3m8s A:294-422 [213155]
Other proteins in same PDB: d3m8sa2
automated match to d1jxea1
protein/DNA complex; complexed with 15p, act, gol, hxb, mg, peg
- Domain(s) for 3oju:
Domain d3ojua1: 3oju A:294-422 [214397]
Other proteins in same PDB: d3ojua2
automated match to d1jxea1
protein/DNA complex; complexed with gol, mg, pge, ssj
- Domain(s) for 3rr7:
Domain d3rr7a1: 3rr7 A:295-422 [216007]
Other proteins in same PDB: d3rr7a2
automated match to d1jxea1
protein/DNA complex; complexed with fmt, gol, mg
- Domain(s) for 3rr8:
Domain d3rr8a1: 3rr8 A:293-422 [216009]
Other proteins in same PDB: d3rr8a2
automated match to d1jxea1
protein/DNA complex; complexed with dg3, gol
- Domain(s) for 3rrg:
Domain d3rrga1: 3rrg A:294-422 [216017]
Other proteins in same PDB: d3rrga2
automated match to d1jxea1
protein/DNA complex; complexed with act, dg3, gol, na
- Domain(s) for 3rrh:
Domain d3rrha1: 3rrh A:295-422 [216019]
Other proteins in same PDB: d3rrha2
automated match to d1jxea1
protein/DNA complex; complexed with act, gol, mg, pge, ttp
- Domain(s) for 3rtv:
Domain d3rtva1: 3rtv A:293-422 [216066]
Other proteins in same PDB: d3rtva2
automated match to d1jxea1
protein/DNA complex; complexed with act, dcp, gol, mg
- Domain(s) for 3t3f:
Domain d3t3fa1: 3t3f A:293-422 [216656]
Other proteins in same PDB: d3t3fa2
automated match to d1jxea1
protein/DNA complex; complexed with fmt, gol, mg, n5p, na
- Domain(s) for 4df4:
Domain d4df4a1: 4df4 A:294-422 [219733]
Other proteins in same PDB: d4df4a2
automated match to d1jxea1
protein/DNA complex; complexed with 0l3, edo, mg
- Domain(s) for 4dfp:
Domain d4dfpa1: 4dfp A:294-422 [219740]
Other proteins in same PDB: d4dfpa2
automated match to d1jxea1
protein/DNA complex; complexed with 0l7, edo, fmt, mg
- Domain(s) for 4dlg:
Domain d4dlga1: 4dlg A:293-422 [219845]
Other proteins in same PDB: d4dlga2
automated match to d1jxea1
protein/DNA complex; complexed with act, dct, gol, mg
- Domain(s) for 4ktq:
Domain d4ktqa1: 4ktq A:294-422 [33706]
Other proteins in same PDB: d4ktqa2
protein/DNA complex
- Domain(s) for 5ktq:
Domain d5ktqa1: 5ktq A:290-422 [33704]
Other proteins in same PDB: d5ktqa2
complexed with dcp
More info for Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase
Timeline for Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase:
- Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase first appeared (with stable ids) in SCOP 1.55
- Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in SCOPe 2.03
- Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in SCOPe 2.05
- Species Thermus aquaticus [TaxId:271] from c.55.3.5 Exonuclease domain of prokaryotic DNA polymerase appears in the current release, SCOPe 2.08