Lineage for Protein: Exonuclease domain of prokaryotic DNA polymerase

  1. Root: SCOP 1.69
  2. 473232Class c: Alpha and beta proteins (a/b) [51349] (136 folds)
  3. 488062Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 488414Superfamily c.55.3: Ribonuclease H-like [53098] (10 families) (S)
    consists of one domain of this fold
  5. 488631Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (7 proteins)
  6. 488665Protein Exonuclease domain of prokaryotic DNA polymerase [53119] (3 species)
    part of Klenow fragment, KF

Species:

  1. 488666Bacillus stearothermophilus, newly identified strain as yet unnamed [TaxId:1422] [53122] (31 PDB entries)
    1. Domain for 1l3s:
    2. Domain for 1l3t:
    3. Domain for 1l3u:
    4. Domain for 1l3v:
    5. Domain for 1l5u:
    6. Domains for 1lv5:
      1. 488693Domain d1lv5a1: 1lv5 A:297-468 [84719]
        Other proteins in same PDB: d1lv5a2, d1lv5b2
      2. 488694Domain d1lv5b1: 1lv5 B:297-468 [84721]
        Other proteins in same PDB: d1lv5a2, d1lv5b2
    7. Domain for 1njw:
    8. Domain for 1njx:
    9. Domain for 1njy:
    10. Domain for 1njz:
    11. Domain for 1nk0:
    12. Domain for 1nk4:
    13. Domain for 1nk5:
    14. Domain for 1nk6:
    15. Domain for 1nk7:
    16. Domain for 1nk8:
    17. Domain for 1nk9:
    18. Domain for 1nkb:
    19. Domain for 1nkc:
    20. Domain for 1nke:
    21. Domain for 1u45:
    22. Domain for 1u47:
    23. Domain for 1u48:
    24. Domain for 1u49:
    25. Domain for 1u4b:
    26. Domain for 1ua0:
    27. Domain for 1ua1:
    28. Domain for 1xwl:
    29. Domain for 2bdp:
    30. Domain for 3bdp:
    31. Domain for 4bdp:
  2. 488699Escherichia coli [TaxId:562] [53120] (14 PDB entries)
    1. Domain for 1d8y:
    2. Domain for 1d9d:
    3. Domain for 1d9f:
    4. Domain for 1dpi:
    5. Domain for 1kfd:
    6. Domain for 1kfs:
    7. Domain for 1kln:
    8. Domain for 1krp:
    9. Domain for 1ksp:
    10. Domain for 1qsl:
    11. Domain for 2kfn:
    12. Domain for 2kfz:
    13. Domain for 2kzm:
    14. Domain for 2kzz:
  3. 488714Thermus aquaticus [TaxId:271] [53121] (13 PDB entries)
    1. Domain for 1bgx:
    2. Domain for 1cmw:
    3. Domain for 1jxe:
    4. Domain for 1ktq:
    5. Domain for 1qss:
    6. Domain for 1qsy:
    7. Domain for 1qtm:
    8. Domain for 1taq:
    9. Domain for 1tau:
    10. Domain for 2ktq:
    11. Domain for 3ktq:
    12. Domain for 4ktq:
    13. Domain for 5ktq:

More info for Protein Exonuclease domain of prokaryotic DNA polymerase from c.55.3.5: DnaQ-like 3'-5' exonuclease

Timeline for Protein Exonuclease domain of prokaryotic DNA polymerase from c.55.3.5: DnaQ-like 3'-5' exonuclease: