Lineage for Species: Simian immunodeficiency virus [TaxId: 11723]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2883383Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2885833Superfamily c.55.3: Ribonuclease H-like [53098] (18 families) (S)
    consists of one domain of this fold
  5. 2886113Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
    Pfam PF00665
  6. 2886114Protein Retroviral integrase, catalytic domain [53108] (5 species)
  7. 2886274Species Simian immunodeficiency virus [TaxId:11723] [53111] (3 PDB entries)

PDB entries in Species: Simian immunodeficiency virus [TaxId: 11723]:

  1. Domain(s) for 1c6v:
    1. 2886279Domain d1c6va_: 1c6v A: [33672]
      Other proteins in same PDB: d1c6vx_
      mutant
    2. 2886280Domain d1c6vb_: 1c6v B: [33673]
      Other proteins in same PDB: d1c6vx_
      mutant
    3. 2886281Domain d1c6vc_: 1c6v C: [33674]
      Other proteins in same PDB: d1c6vx_
      mutant
    4. 2886282Domain d1c6vd_: 1c6v D: [33675]
      Other proteins in same PDB: d1c6vx_
      mutant
  2. Domain(s) for 6rwm:
    1. 2886275Domain d6rwmd1: 6rwm D:57-222 [380198]
      Other proteins in same PDB: d6rwmc1, d6rwmc2, d6rwmd2, d6rwme1, d6rwme2, d6rwmf1, d6rwmk1, d6rwmk2, d6rwml2, d6rwmm1, d6rwmm2, d6rwmn1
      automated match to d1ex4b2
      protein/DNA complex; complexed with cl, klq, mg, zn
    2. 2886276Domain d6rwml1: 6rwm L:57-222 [380238]
      Other proteins in same PDB: d6rwmc1, d6rwmc2, d6rwmd2, d6rwme1, d6rwme2, d6rwmf1, d6rwmk1, d6rwmk2, d6rwml2, d6rwmm1, d6rwmm2, d6rwmn1
      automated match to d1ex4b2
      protein/DNA complex; complexed with cl, klq, mg, zn
  3. Domain(s) for 6rwn:
    1. 2886277Domain d6rwnd1: 6rwn D:57-222 [380196]
      Other proteins in same PDB: d6rwnc1, d6rwnc2, d6rwnd2, d6rwne1, d6rwne2, d6rwnf1, d6rwnk1, d6rwnk2, d6rwnl2, d6rwnm1, d6rwnm2, d6rwnn1
      automated match to d1ex4b2
      protein/DNA complex; complexed with cl, dlu, mg, zn
    2. 2886278Domain d6rwnl1: 6rwn L:57-222 [380220]
      Other proteins in same PDB: d6rwnc1, d6rwnc2, d6rwnd2, d6rwne1, d6rwne2, d6rwnf1, d6rwnk1, d6rwnk2, d6rwnl2, d6rwnm1, d6rwnm2, d6rwnn1
      automated match to d1ex4b2
      protein/DNA complex; complexed with cl, dlu, mg, zn

More info for Species Simian immunodeficiency virus [TaxId:11723] from c.55.3.2 Retroviral integrase, catalytic domain

Timeline for Species Simian immunodeficiency virus [TaxId:11723] from c.55.3.2 Retroviral integrase, catalytic domain: