Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) consists of one domain of this fold |
Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins) |
Protein Retroviral integrase, catalytic domain [53108] (3 species) |
Species Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries) |
Domain d1a5va_: 1a5v A: [33629] complexed with mn, y3 |
Domain d1a5wa_: 1a5w A: [33632] complexed with y3 |
Domain d1a5xa_: 1a5x A: [33630] complexed with y3 |
Domain d1asua_: 1asu A: [33626] complexed with epe |
Domain d1asva_: 1asv A: [33634] |
Domain d1aswa_: 1asw A: [33627] complexed with epe, ipa |
Domain d1c0ma2: 1c0m A:49-216 [33640] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0mb2: 1c0m B:54-216 [33641] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0mc2: 1c0m C:49-216 [33642] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0md2: 1c0m D:54-216 [33643] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c1aa2: 1c1a A:52-216 [33644] Other proteins in same PDB: d1c1aa1, d1c1ab1 |
Domain d1c1ab2: 1c1a B:55-216 [33645] Other proteins in same PDB: d1c1aa1, d1c1ab1 |
Domain d1cxqa_: 1cxq A: [33621] complexed with epe, gol |
Domain d1cxua_: 1cxu A: [33624] complexed with cit, gol |
Domain d1cz9a_: 1cz9 A: [33623] complexed with cit, so4 |
Domain d1czba_: 1czb A: [33622] complexed with epe |
Domain d1vsda_: 1vsd A: [33625] complexed with epe, mg |
Domain d1vsea_: 1vse A: [33631] complexed with epe |
Domain d1vsfa_: 1vsf A: [33628] complexed with epe, mn |
Domain d1vsha_: 1vsh A: [33633] complexed with epe, zn |
Domain d1vsia_: 1vsi A: [33638] complexed with ca, epe |
Domain d1vsja_: 1vsj A: [33636] complexed with cd, epe |
Domain d1vska_: 1vsk A: [33639] mutant |
Domain d1vsla_: 1vsl A: [33637] complexed with zn; mutant |
Domain d1vsma_: 1vsm A: [33635] |
Domain d3o4na_: 3o4n A: [182791] automated match to d1asua_ complexed with mes, zn |
Domain d3o4nb_: 3o4n B: [182792] automated match to d1asua_ complexed with mes, zn |
Domain d3o4qa_: 3o4q A: [182793] automated match to d1asua_ complexed with flc |
Timeline for Species Rous sarcoma virus RSV [TaxId:11886] from c.55.3.2 Retroviral integrase, catalytic domain: