Class c: Alpha and beta proteins (a/b) [51349] (134 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (10 families) consists of one domain of this fold |
Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (1 protein) |
Protein Retroviral integrase, catalytic domain [53108] (3 species) |
Human immunodeficiency virus type 1 [TaxId:11676] [53110] (17 PDB entries) |
Domain d1b92a_: 1b92 A: [33654] complexed with cac, so4; mutant |
Domain d1b9da_: 1b9d A: [33649] complexed with cac, so4; mutant |
Domain d1b9fa_: 1b9f A: [33648] complexed with cac, so4; mutant |
Domain d1bhl__: 1bhl - [33662] complexed with cas; mutant |
Domain d1bi4a_: 1bi4 A: [33666] |
Domain d1bi4b_: 1bi4 B: [33667] |
Domain d1bi4c_: 1bi4 C: [33668] mutant |
Domain d1bisa_: 1bis A: [33650] |
Domain d1bisb_: 1bis B: [33651] mutant |
Domain d1biua_: 1biu A: [33663] |
Domain d1biub_: 1biu B: [33664] |
Domain d1biuc_: 1biu C: [33665] complexed with mg; mutant |
Domain d1biza_: 1biz A: [33652] |
Domain d1bizb_: 1biz B: [33653] complexed with cac; mutant |
Domain d1bl3a_: 1bl3 A: [33655] |
Domain d1bl3b_: 1bl3 B: [33656] |
Domain d1bl3c_: 1bl3 C: [33657] complexed with mg; mutant |
Domain d1ex4a2: 1ex4 A:56-222 [33670] Other proteins in same PDB: d1ex4a1, d1ex4b1 |
Domain d1ex4b2: 1ex4 B:55-222 [33671] Other proteins in same PDB: d1ex4a1, d1ex4b1 complexed with cps; mutant |
Domain d1exqa_: 1exq A: [33646] |
Domain d1exqb_: 1exq B: [33647] complexed with cd, cl, so4; mutant |
Domain d1hyva_: 1hyv A: [61424] complexed with caf, cl, so4, tta; mutant |
Domain d1hyza_: 1hyz A: [61426] complexed with caf, cl, so4, tto; mutant |
Domain d1itg__: 1itg - [33661] complexed with cac; mutant |
Domain d1k6ya2: 1k6y A:56-210 [68240] Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1 |
Domain d1k6yb2: 1k6y B:56-212 [68242] Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1 |
Domain d1k6yc2: 1k6y C:56-209 [68244] Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1 |
Domain d1k6yd2: 1k6y D:56-211 [68246] Other proteins in same PDB: d1k6ya1, d1k6yb1, d1k6yc1, d1k6yd1 complexed with k, po4, zn; mutant |
Domain d1qs4a_: 1qs4 A: [33658] |
Domain d1qs4b_: 1qs4 B: [33659] |
Domain d1qs4c_: 1qs4 C: [33660] |
Domain d2itg__: 2itg - [33669] mutant |
Rous sarcoma virus (RSV, avian sarcoma virus) [53109] (21 PDB entries) |
Domain d1a5v__: 1a5v - [33629] complexed with mn, y3 |
Domain d1a5w__: 1a5w - [33632] complexed with y3 |
Domain d1a5x__: 1a5x - [33630] complexed with y3 |
Domain d1asu__: 1asu - [33626] complexed with epe; mutant |
Domain d1asv__: 1asv - [33634] complexed with ohe; mutant |
Domain d1asw__: 1asw - [33627] complexed with epe, ipa; mutant |
Domain d1c0ma2: 1c0m A:49-216 [33640] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0mb2: 1c0m B:54-216 [33641] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0mc2: 1c0m C:49-216 [33642] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 |
Domain d1c0md2: 1c0m D:54-216 [33643] Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1 mutant |
Domain d1c1aa2: 1c1a A:52-216 [33644] Other proteins in same PDB: d1c1aa1, d1c1ab1 |
Domain d1c1ab2: 1c1a B:55-216 [33645] Other proteins in same PDB: d1c1aa1, d1c1ab1 mutant |
Domain d1cxqa_: 1cxq A: [33621] complexed with epe, gol; mutant |
Domain d1cxua_: 1cxu A: [33624] complexed with cit, gol; mutant |
Domain d1cz9a_: 1cz9 A: [33623] complexed with cit, sul; mutant |
Domain d1czba_: 1czb A: [33622] complexed with epe; mutant |
Domain d1vsd__: 1vsd - [33625] complexed with epe, mg, ohe |
Domain d1vse__: 1vse - [33631] complexed with epe |
Domain d1vsf__: 1vsf - [33628] complexed with epe, mn |
Domain d1vsh__: 1vsh - [33633] complexed with epe, ocy, zn |
Domain d1vsi__: 1vsi - [33638] complexed with ca, epe, ocy |
Domain d1vsj__: 1vsj - [33636] complexed with cd, epe, ocy |
Domain d1vsk__: 1vsk - [33639] mutant |
Domain d1vsla_: 1vsl A: [33637] complexed with zn2; mutant |
Domain d1vsma_: 1vsm A: [33635] |
Simian immunodeficiency virus [53111] (1 PDB entry) |
Domain d1c6va_: 1c6v A: [33672] Other proteins in same PDB: d1c6vx_ |
Domain d1c6vb_: 1c6v B: [33673] Other proteins in same PDB: d1c6vx_ |
Domain d1c6vc_: 1c6v C: [33674] Other proteins in same PDB: d1c6vx_ |
Domain d1c6vd_: 1c6v D: [33675] Other proteins in same PDB: d1c6vx_ mutant |
Timeline for Protein Retroviral integrase, catalytic domain from c.55.3.2: Retroviral integrase, catalytic domain: