Lineage for Protein: Rad50

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2112785Family c.37.1.12: ABC transporter ATPase domain-like [52686] (25 protein domains)
    there are two additional subdomains inserted into the central core that has a RecA-like topology
  6. 2113012Protein Rad50 [52691] (1 species)

Species:

  • 2113013Pyrococcus furiosus [TaxId:2261] [52692] (4 PDB entries)
    1. Domain for 1f2t:
      • 2113014Domain d1f2t.1: 1f2t A:,B: [32373]
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
    2. Domains for 1f2u:
      1. 2113015Domain d1f2u.1: 1f2u A:,B: [32374]
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        complexed with atp, mg
      2. 2113016Domain d1f2u.2: 1f2u C:,D: [32375]
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted
        complexed with atp, mg
    3. Domain for 1ii8:
      • 2113018Domain d1ii8.1: 1ii8 A:,B: [62417]
        N- and C-terminal subdomains; include a small fragment of the middle coiled coil domain
        complexed with po4
    4. Domain for 1us8:
      • 2113017Domain d1us8.1: 1us8 A:,B: [99859]
        N- and C-terminal subdomains only; the middle coiled coil domain is deleted

More info for Protein Rad50 from c.37.1.12: ABC transporter ATPase domain-like

Timeline for Protein Rad50 from c.37.1.12: ABC transporter ATPase domain-like: