Lineage for Family c.37.1.10: Nitrogenase iron protein-like

  1. Root: SCOP 1.67
  2. 383641Class c: Alpha and beta proteins (a/b) [51349] (130 folds)
  3. 393331Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 393332Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (22 families) (S)
    division into families based on beta-sheet topologies
  5. 394266Family c.37.1.10: Nitrogenase iron protein-like [52652] (10 proteins)
    core: parallel beta-sheet of 7 strands; order 3241567

Proteins:

  1. 394267Adenylosuccinate synthetase, PurA [52655] (5 species)
    common fold is interrupted by an all-alpha subdomain, residues 100-200
    1. 394268Species Bread wheat (Triticum aestivum) [TaxId:4565] [52658] (1 PDB entry)
    2. 394271Species Escherichia coli [TaxId:562] [52656] (23 PDB entries)
    3. 394300Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [102372] (1 PDB entry)
    4. 394302Species Mouse (Mus musculus) [TaxId:10090] [69491] (8 PDB entries)
    5. 394313Species Mouse-ear cress (Arabidopsis thaliana) [TaxId:3702] [52657] (1 PDB entry)
  2. 394316Arsenite-translocating ATPase ArsA [52668] (1 species)
    Duplication: consists of two domains of this fold arranged as the NIP subunits in the dimer
  3. 394330Cell division regulator MinD [64019] (3 species)
    1. 394331Species Archaeon Archaeoglobus fulgidus [TaxId:2234] [64020] (1 PDB entry)
    2. 394333Species Archaeon Pyrococcus furiosus [TaxId:2261] [64021] (2 PDB entries)
    3. 394336Species Archaeon Pyrococcus horikoshii [TaxId:53953] [64022] (1 PDB entry)
  4. 394338Dethiobiotin synthetase [52653] (1 species)
  5. 394353Formyltetrahydrofolate synthetase [52659] (1 species)
    modified P-loop; there are many insertions in the common fold
  6. 394361GTPase domain of the signal recognition particle receptor FtsY [52666] (2 species)
    1. 394362Species Escherichia coli [TaxId:562] [52667] (1 PDB entry)
    2. 394364Species Thermus aquaticus [TaxId:271] [102374] (2 PDB entries)
  7. 394367GTPase domain of the signal sequence recognition protein Ffh [52664] (3 species)
    1. 394368Species Archaeon Acidianus ambivalens [TaxId:2283] [64023] (2 PDB entries)
    2. 394371Species Archaeon Sulfolobus solfataricus [TaxId:2287] [102373] (2 PDB entries)
    3. 394378Species Thermus aquaticus [TaxId:271] [52665] (11 PDB entries)
  8. 394395Hypothetical protein YjiA, N-terminal domain [89671] (1 species)
    homologue of the cobalamin biosynthesis protein CobW
  9. 394398Molybdopterin-guanine dinucleotide biosynthesis protein MobB [89673] (1 species)
    forms segment-swapped dimer
  10. 394404Nitrogenase iron protein [52661] (2 species)
    1. 394405Species Azotobacter vinelandii [TaxId:354] [52662] (12 PDB entries)
    2. 394449Species Clostridium pasteurianum [TaxId:1501] [52663] (1 PDB entry)

More info for Family c.37.1.10: Nitrogenase iron protein-like

Timeline for Family c.37.1.10: Nitrogenase iron protein-like: