SCOPe 2.06: Protein: Myosin S1, motor domain

Lineage for Protein: Myosin S1, motor domain

Root: SCOPe 2.06
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
division into families based on beta-sheet topologies
Family c.37.1.9: Motor proteins [52641] (5 proteins)
Protein Myosin S1, motor domain [52642] (5 species)
common fold is interrupted with some all-alpha subdomains

Species:

Bay scallop (Aequipecten irradians) [TaxId:31199] [52644] (11 PDB entries)
Uniprot P24733 3-836 ! Uniprot P24733 6-837
1. Domain for 1b7t:
  - Domain d1b7ta4: 1b7t A:5-28,A:77-835 [32169]
    Other proteins in same PDB: d1b7ta1, d1b7ty_, d1b7tz_
    complexed with adp, ca, mg
2. Domain for 1dfk:
  - Domain d1dfka2: 1dfk A:6-28,A:77-835 [32170]
    Other proteins in same PDB: d1dfka1, d1dfky_, d1dfkz_
    complexed with ca
3. Domains for 1dfl:
  1. Domain d1dfla2: 1dfl A:5-28,A:77-835 [32171]
    Other proteins in same PDB: d1dfla1, d1dflb1, d1dflw_, d1dflx_, d1dfly_, d1dflz_
    complexed with adp, ca, mg, vo4
  2. Domain d1dflb2: 1dfl B:5-28,B:77-835 [32172]
    Other proteins in same PDB: d1dfla1, d1dflb1, d1dflw_, d1dflx_, d1dfly_, d1dflz_
    complexed with adp, ca, mg, vo4
4. Domain for 1kk7:
  - Domain d1kk7a2: 1kk7 A:5-28,A:77-837 [77425]
    Other proteins in same PDB: d1kk7a1, d1kk7y_, d1kk7z_
    complexed with ca, mg, so4
5. Domain for 1kk8:
  - Domain d1kk8a2: 1kk8 A:1-28,A:77-837 [77429]
    Other proteins in same PDB: d1kk8a1, d1kk8b_, d1kk8c_
    complexed with adp, bef, ca, gol, mg
6. Domain for 1kqm:
  - Domain d1kqma2: 1kqm A:5-28,A:77-835 [77489]
    Other proteins in same PDB: d1kqma1, d1kqmb_, d1kqmc_
    complexed with anp, ca, mg
7. Domain for 1kwo:
  - Domain d1kwoa2: 1kwo A:5-28,A:77-835 [77570]
    Other proteins in same PDB: d1kwoa1, d1kwob_, d1kwoc_
    complexed with ags, ca, mg, pdm
8. Domain for 1l2o:
  - Domain d1l2oa2: 1l2o A:5-28,A:77-835 [77659]
    Other proteins in same PDB: d1l2oa1, d1l2ob_, d1l2oc_
    complexed with adp, ca, mg, pdm
9. Domain for 1qvi:
  - Domain d1qvia2: 1qvi A:6-28,A:77-837 [96428]
    Other proteins in same PDB: d1qvia1, d1qviy_, d1qviz_
    complexed with adp, ca, mg, vo4
10. Domain for 1s5g:
  - Domain d1s5ga2: 1s5g A:3-28,A:77-836 [105264]
    Other proteins in same PDB: d1s5ga1, d1s5gy_, d1s5gz_
    complexed with adp, ca, mg, so4
11. Domain for 1sr6:
  - Domain d1sr6a2: 1sr6 A:6-28,A:77-837 [105954]
    Other proteins in same PDB: d1sr6a1, d1sr6b_, d1sr6c_
    complexed with ca, mg, so4
Chicken (Gallus gallus), pectoral muscle [TaxId:9031] [52643] (4 PDB entries)
1. Domains for 1br1:
  1. Domain d1br1a2: 1br1 A:2-33,A:80-821 [32161]
    Other proteins in same PDB: d1br1a1, d1br1b_, d1br1c1, d1br1d_, d1br1e1, d1br1f_, d1br1g1, d1br1h_
    complexed with adp, alf, mg
  2. Domain d1br1c2: 1br1 C:2-33,C:80-821 [32162]
    Other proteins in same PDB: d1br1a1, d1br1b_, d1br1c1, d1br1d_, d1br1e1, d1br1f_, d1br1g1, d1br1h_
    complexed with adp, alf, mg
  3. Domain d1br1e2: 1br1 E:2-33,E:80-821 [32163]
    Other proteins in same PDB: d1br1a1, d1br1b_, d1br1c1, d1br1d_, d1br1e1, d1br1f_, d1br1g1, d1br1h_
    complexed with adp, alf, mg
  4. Domain d1br1g2: 1br1 G:2-33,G:80-821 [32164]
    Other proteins in same PDB: d1br1a1, d1br1b_, d1br1c1, d1br1d_, d1br1e1, d1br1f_, d1br1g1, d1br1h_
    complexed with adp, alf, mg
2. Domains for 1br2:
  1. Domain d1br2a2: 1br2 A:80-789 [32155]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
  2. Domain d1br2b2: 1br2 B:80-789 [32156]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
  3. Domain d1br2c2: 1br2 C:80-789 [32157]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
  4. Domain d1br2d2: 1br2 D:80-789 [32158]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
  5. Domain d1br2e2: 1br2 E:80-789 [32159]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
  6. Domain d1br2f2: 1br2 F:80-789 [32160]
    Other proteins in same PDB: d1br2a1, d1br2b1, d1br2c1, d1br2d1, d1br2e1, d1br2f1
    complexed with adp, alf, mg
3. Domains for 1br4:
  1. Domain d1br4a2: 1br4 A:2-33,A:80-821 [32165]
    Other proteins in same PDB: d1br4a1, d1br4b_, d1br4c1, d1br4d_, d1br4e1, d1br4f_, d1br4g1, d1br4h_
    complexed with adp, bef, mg
  2. Domain d1br4c2: 1br4 C:2-33,C:80-821 [32166]
    Other proteins in same PDB: d1br4a1, d1br4b_, d1br4c1, d1br4d_, d1br4e1, d1br4f_, d1br4g1, d1br4h_
    complexed with adp, bef, mg
  3. Domain d1br4e2: 1br4 E:2-33,E:80-821 [32167]
    Other proteins in same PDB: d1br4a1, d1br4b_, d1br4c1, d1br4d_, d1br4e1, d1br4f_, d1br4g1, d1br4h_
    complexed with adp, bef, mg
  4. Domain d1br4g2: 1br4 G:2-33,G:80-821 [32168]
    Other proteins in same PDB: d1br4a1, d1br4b_, d1br4c1, d1br4d_, d1br4e1, d1br4f_, d1br4g1, d1br4h_
    complexed with adp, bef, mg
4. Domain for 2mys:
  - Domain d2mysa2: 2mys A:4-33,A:80-843 [32154]
    Other proteins in same PDB: d2mysa1, d2mysb_, d2mysc_
    complexed with mg, so4
Chicken (Gallus gallus), Va isoform [TaxId:9031] [102369] (2 PDB entries)
1. Domain for 1oe9:
  - Domain d1oe9a2: 1oe9 A:63-795 [92793]
    Other proteins in same PDB: d1oe9a1, d1oe9b_
    complexed with so4
2. Domain for 1w7j:
  - Domain d1w7ja2: 1w7j A:63-792 [120689]
    Other proteins in same PDB: d1w7ja1, d1w7jb_
    automated match to d1oe9a2
    complexed with adp, bef, mg
Slime mold (Dictyostelium discoideum) [TaxId:44689] [52645] (18 PDB entries)
1. Domain for 1d0x:
  - Domain d1d0xa2: 1d0x A:2-33,A:80-759 [32180]
    Other proteins in same PDB: d1d0xa1
    complexed with mg, mnq
2. Domain for 1d0y:
  - Domain d1d0ya2: 1d0y A:2-33,A:80-759 [32178]
    Other proteins in same PDB: d1d0ya1
    complexed with mg, onp
3. Domain for 1d0z:
  - Domain d1d0za2: 1d0z A:2-33,A:80-759 [32181]
    Other proteins in same PDB: d1d0za1
    complexed with mg, pnq
4. Domain for 1d1a:
  - Domain d1d1aa2: 1d1a A:2-33,A:80-759 [32186]
    Other proteins in same PDB: d1d1aa1
    complexed with dae, mg
5. Domain for 1d1b:
  - Domain d1d1ba2: 1d1b A:2-33,A:80-759 [32182]
    Other proteins in same PDB: d1d1ba1
    complexed with daq, mg
6. Domain for 1d1c:
  - Domain d1d1ca2: 1d1c A:2-33,A:80-759 [32185]
    Other proteins in same PDB: d1d1ca1
    complexed with mg, nmq
7. Domain for 1fmv:
  - Domain d1fmva2: 1fmv A:2-33,A:80-759 [32177]
    Other proteins in same PDB: d1fmva1
    complexed with cl
8. Domain for 1fmw:
  - Domain d1fmwa2: 1fmw A:2-33,A:80-759 [32183]
    Other proteins in same PDB: d1fmwa1
    complexed with atp, mg
9. Domain for 1jwy:
  - Domain d1jwya2: 1jwy A:14-30,A:80-776 [67400]
    Other proteins in same PDB: d1jwya1, d1jwya3, d1jwyb_
    complexed with adp, bgc, gdp, mg
10. Domain for 1jx2:
  - Domain d1jx2a2: 1jx2 A:14-30,A:80-776 [67403]
    Other proteins in same PDB: d1jx2a1, d1jx2a3, d1jx2b_
    complexed with adp, bgc, mg
11. Domain for 1lvk:
  - Domain d1lvka2: 1lvk A:2-33,A:80-759 [32173]
    Other proteins in same PDB: d1lvka1
    complexed with bef, mg, mnt
12. Domain for 1mma:
  - Domain d1mmaa2: 1mma A:2-33,A:80-759 [32184]
    Other proteins in same PDB: d1mmaa1
    complexed with adp, mg
13. Domain for 1mmd:
  - Domain d1mmda2: 1mmd A:2-33,A:80-759 [32175]
    Other proteins in same PDB: d1mmda1
    complexed with adp, bef, mg
14. Domain for 1mmg:
  - Domain d1mmga2: 1mmg A:2-33,A:80-759 [32176]
    Other proteins in same PDB: d1mmga1
    complexed with ags, mg
15. Domain for 1mmn:
  - Domain d1mmna2: 1mmn A:2-33,A:80-759 [32179]
    Other proteins in same PDB: d1mmna1
    complexed with anp, mg
16. Domain for 1mnd:
  - Domain d1mnda2: 1mnd A:2-33,A:80-690 [32188]
    Other proteins in same PDB: d1mnda1
    complexed with adp, alf, mg
17. Domain for 1mne:
  - Domain d1mnea2: 1mne A:2-33,A:80-759 [32187]
    Other proteins in same PDB: d1mnea1
    complexed with mg, pop
18. Domain for 1vom:
  - Domain d1voma2: 1vom A:2-33,A:80-747 [32174]
    Other proteins in same PDB: d1voma1
    complexed with adp, mg, vo4
Slime mold (Dictyostelium discoideum), class-I myosin MyoE [TaxId:44689] [75206] (1 PDB entry)
lacks the SH3-like insert domain
- Domains for 1lkx:
  1. Domain d1lkxa_: 1lkx A: [73981]
    complexed with adp, mg, vo4
  2. Domain d1lkxb_: 1lkx B: [73982]
    complexed with adp, mg, vo4
  3. Domain d1lkxc_: 1lkx C: [73983]
    complexed with adp, mg, vo4
  4. Domain d1lkxd_: 1lkx D: [73984]
    complexed with adp, mg, vo4

More info for Protein Myosin S1, motor domain from c.37.1.9: Motor proteins

Timeline for Protein Myosin S1, motor domain from c.37.1.9: Motor proteins:

Protein Myosin S1, motor domain from c.37.1.9: Motor proteins first appeared (with stable ids) in SCOP 1.55
Protein Myosin S1, motor domain from c.37.1.9: Motor proteins appears in SCOPe 2.05
Protein Myosin S1, motor domain from c.37.1.9: Motor proteins appears in SCOPe 2.07
Protein Myosin S1, motor domain from c.37.1.9: Motor proteins appears in the current release, SCOPe 2.08