SCOPe 2.05: Family c.37.1.9: Motor proteins

Lineage for Family c.37.1.9: Motor proteins

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.9: Motor proteins [52641] (5 proteins)

Proteins:

1. Kinesin [52646] (7 species)

   1. Species Fungus (Neurospora crassa) [TaxId:5141] [69490] (1 PDB entry)

   2. Species Human (Homo sapiens) [TaxId:9606] [52647] (3 PDB entries)

   3. Species Human (Homo sapiens), mitotic kinesin eg5 [TaxId:9606] [64018] (13 PDB entries)

   4. Species Malaria parasite (Plasmodium falciparum) [TaxId:5833] [102371] (1 PDB entry)

   5. Species Mouse (Mus musculus), kif1a [TaxId:10090] [64017] (9 PDB entries)
      Uniprot P33173 3-355

   6. Species Mouse (Mus musculus), kif2c [TaxId:10090] [102370] (2 PDB entries)

   7. Species Norway rat (Rattus norvegicus) [TaxId:10116] [52648] (2 PDB entries)

2. Kinesin heavy chain-like protein [110548] (1 species)

   • Species Potato (Solanum tuberosum) [TaxId:4113] [110549] (3 PDB entries)
     Uniprot Q41460 884-1252

3. Kinesin motor Ncd (non-claret disjunctional) [52649] (2 species)
   contains coiled-coil neck

   1. Species Baker's yeast (Saccharomyces cerevisiae), Kar [TaxId:4932] [52651] (5 PDB entries)
      kinesin-like protein

   2. Species Fruit fly (Drosophila melanogaster) [TaxId:7227] [52650] (4 PDB entries)

4. Myosin S1, motor domain [52642] (5 species)
   common fold is interrupted with some all-alpha subdomains

   1. Species Bay scallop (Aequipecten irradians) [TaxId:31199] [52644] (11 PDB entries)
      Uniprot P24733 3-836 ! Uniprot P24733 6-837

   2. Species Chicken (Gallus gallus), pectoral muscle [TaxId:9031] [52643] (4 PDB entries)

   3. Species Chicken (Gallus gallus), Va isoform [TaxId:9031] [102369] (2 PDB entries)

   4. Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [52645] (18 PDB entries)

   5. Species Slime mold (Dictyostelium discoideum), class-I myosin MyoE [TaxId:44689] [75206] (1 PDB entry)
      lacks the SH3-like insert domain

5. automated matches [190129] (6 species)
   not a true protein

   1. Species Ashbya gossypii [TaxId:284811] [195661] (1 PDB entry)

   2. Species Chicken (Gallus gallus) [TaxId:9031] [230373] (2 PDB entries)

   3. Species Human (Homo sapiens) [TaxId:9606] [187145] (32 PDB entries)

   4. Species Mouse (Mus musculus) [TaxId:10090] [187256] (3 PDB entries)

   5. Species Slime mold (Dictyostelium discoideum) [TaxId:44689] [226127] (1 PDB entry)

   6. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [188907] (2 PDB entries)

More info for Family c.37.1.9: Motor proteins

Timeline for Family c.37.1.9: Motor proteins:

• Family c.37.1.9: Motor proteins first appeared (with stable ids) in SCOP 1.55
  
• Family c.37.1.9: Motor proteins appears in SCOPe 2.04
  
• Family c.37.1.9: Motor proteins appears in SCOPe 2.06
  
• Family c.37.1.9: Motor proteins appears in the current release, SCOPe 2.08