Lineage for Species: Herpes simplex virus type 1, different strains [TaxId: 10298]

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2865683Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2865684Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (27 families) (S)
    division into families based on beta-sheet topologies
  5. 2865685Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 proteins)
    parallel beta-sheet of 5 strands, order 23145
  6. 2866070Protein Thymidine kinase [52552] (4 species)
    contains insert all-alpha subdomain, res. 251-322
  7. 2866084Species Herpes simplex virus type 1, different strains [TaxId:10298] [52553] (33 PDB entries)
    Uniprot P03176 46-375

PDB entries in Species: Herpes simplex virus type 1, different strains [TaxId: 10298]:

  1. Domain(s) for 1e2h:
    1. 2866119Domain d1e2ha_: 1e2h A: [31856]
      complexed with so4
      has additional subdomain(s) that are not in the common domain
    2. 2866120Domain d1e2hb_: 1e2h B: [31857]
      complexed with so4
      has additional subdomain(s) that are not in the common domain
  2. Domain(s) for 1e2i:
    1. 2866123Domain d1e2ia_: 1e2i A: [31858]
      complexed with aps, arp, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866124Domain d1e2ib_: 1e2i B: [31859]
      complexed with aps, arp, so4
      has additional subdomain(s) that are not in the common domain
  3. Domain(s) for 1e2j:
    1. 2866143Domain d1e2ja_: 1e2j A: [31874]
      complexed with so4, thm
      has additional subdomain(s) that are not in the common domain
    2. 2866144Domain d1e2jb_: 1e2j B: [31875]
      complexed with so4, thm
      has additional subdomain(s) that are not in the common domain
  4. Domain(s) for 1e2k:
    1. 2866097Domain d1e2ka_: 1e2k A: [31854]
      complexed with so4, tmc; mutant
      has additional subdomain(s) that are not in the common domain
    2. 2866098Domain d1e2kb_: 1e2k B: [31855]
      complexed with so4, tmc; mutant
      has additional subdomain(s) that are not in the common domain
  5. Domain(s) for 1e2l:
    1. 2866121Domain d1e2la_: 1e2l A: [31872]
      complexed with so4, tmc; mutant
      has additional subdomain(s) that are not in the common domain
    2. 2866122Domain d1e2lb_: 1e2l B: [31873]
      complexed with so4, tmc; mutant
      has additional subdomain(s) that are not in the common domain
  6. Domain(s) for 1e2m:
    1. 2866101Domain d1e2ma_: 1e2m A: [59166]
      complexed with hpt, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866102Domain d1e2mb_: 1e2m B: [59167]
      complexed with hpt, so4
      has additional subdomain(s) that are not in the common domain
  7. Domain(s) for 1e2n:
    1. 2866099Domain d1e2na_: 1e2n A: [59168]
      complexed with rca, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866100Domain d1e2nb_: 1e2n B: [59169]
      complexed with rca, so4
      has additional subdomain(s) that are not in the common domain
  8. Domain(s) for 1e2p:
    1. 2866125Domain d1e2pa_: 1e2p A: [59170]
      complexed with ccv, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866126Domain d1e2pb_: 1e2p B: [59171]
      complexed with ccv, so4
      has additional subdomain(s) that are not in the common domain
  9. Domain(s) for 1ki2:
    1. 2866113Domain d1ki2a_: 1ki2 A: [31870]
      protein/DNA complex; complexed with ga2, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866114Domain d1ki2b_: 1ki2 B: [31871]
      protein/DNA complex; complexed with ga2, so4
      has additional subdomain(s) that are not in the common domain
  10. Domain(s) for 1ki3:
    1. 2866135Domain d1ki3a_: 1ki3 A: [31880]
      protein/DNA complex; complexed with pe2, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866136Domain d1ki3b_: 1ki3 B: [31881]
      protein/DNA complex; complexed with pe2, so4
      has additional subdomain(s) that are not in the common domain
  11. Domain(s) for 1ki4:
    1. 2866131Domain d1ki4a_: 1ki4 A: [31878]
      protein/DNA complex; complexed with btd, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866132Domain d1ki4b_: 1ki4 B: [31879]
      protein/DNA complex; complexed with btd, so4
      has additional subdomain(s) that are not in the common domain
  12. Domain(s) for 1ki6:
    1. 2866129Domain d1ki6a_: 1ki6 A: [31876]
      protein/DNA complex; complexed with ahu, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866130Domain d1ki6b_: 1ki6 B: [31877]
      protein/DNA complex; complexed with ahu, so4
      has additional subdomain(s) that are not in the common domain
  13. Domain(s) for 1ki7:
    1. 2866109Domain d1ki7a_: 1ki7 A: [31868]
      protein/DNA complex; complexed with id2, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866110Domain d1ki7b_: 1ki7 B: [31869]
      protein/DNA complex; complexed with id2, so4
      has additional subdomain(s) that are not in the common domain
  14. Domain(s) for 1ki8:
    1. 2866105Domain d1ki8a_: 1ki8 A: [31866]
      protein/DNA complex; complexed with bvd, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866106Domain d1ki8b_: 1ki8 B: [31867]
      protein/DNA complex; complexed with bvd, so4
      has additional subdomain(s) that are not in the common domain
  15. Domain(s) for 1kim:
    1. 2866103Domain d1kima_: 1kim A: [31864]
      protein/DNA complex; complexed with so4, thm
      has additional subdomain(s) that are not in the common domain
    2. 2866104Domain d1kimb_: 1kim B: [31865]
      protein/DNA complex; complexed with so4, thm
      has additional subdomain(s) that are not in the common domain
  16. Domain(s) for 1of1:
    1. 2866127Domain d1of1a_: 1of1 A: [103924]
      complexed with sct, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866128Domain d1of1b_: 1of1 B: [103925]
      complexed with sct, so4
      has additional subdomain(s) that are not in the common domain
  17. Domain(s) for 1p7c:
    1. 2866111Domain d1p7ca_: 1p7c A: [94217]
      complexed with so4, t5a, thm
      has additional subdomain(s) that are not in the common domain
    2. 2866112Domain d1p7cb_: 1p7c B: [94218]
      complexed with so4, t5a, thm
      has additional subdomain(s) that are not in the common domain
  18. Domain(s) for 1qhi:
    1. 2866093Domain d1qhia_: 1qhi A: [31860]
      protein/DNA complex; complexed with bpg, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866094Domain d1qhib_: 1qhi B: [31861]
      protein/DNA complex; complexed with bpg, so4
      has additional subdomain(s) that are not in the common domain
  19. Domain(s) for 1vtk:
    • 2866137Domain d1vtka_: 1vtk A: [31882]
      complexed with adp, tmp
      has additional subdomain(s) that are not in the common domain
  20. Domain(s) for 2ki5:
    1. 2866095Domain d2ki5a_: 2ki5 A: [31862]
      protein/DNA complex; complexed with ac2, so4
      has additional subdomain(s) that are not in the common domain
    2. 2866096Domain d2ki5b_: 2ki5 B: [31863]
      protein/DNA complex; complexed with ac2, so4
      has additional subdomain(s) that are not in the common domain
  21. Domain(s) for 2vtk:
    • 2866140Domain d2vtka_: 2vtk A: [31883]
      complexed with adp, thm
      has additional subdomain(s) that are not in the common domain
  22. Domain(s) for 3f0t:
    1. 2866087Domain d3f0ta_: 3f0t A: [175383]
      automated match to d1p7cb_
      protein/DNA complex; complexed with ncv, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866088Domain d3f0tb_: 3f0t B: [175384]
      automated match to d1p7cb_
      protein/DNA complex; complexed with ncv, so4

      has additional subdomain(s) that are not in the common domain
  23. Domain(s) for 3rdp:
    1. 2866138Domain d3rdpa_: 3rdp A: [200468]
      automated match to d1e2ka_
      protein/DNA complex; complexed with nmf, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866139Domain d3rdpb_: 3rdp B: [193674]
      automated match to d1p7cb_
      protein/DNA complex; complexed with nmf, so4

      has additional subdomain(s) that are not in the common domain
  24. Domain(s) for 3vtk:
    • 2866145Domain d3vtka_: 3vtk A: [31884]
      complexed with 5iu, adp
      has additional subdomain(s) that are not in the common domain
  25. Domain(s) for 4ivp:
    1. 2866091Domain d4ivpa_: 4ivp A: [223428]
      automated match to d1e2ka_
      protein/DNA complex; complexed with i51, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866092Domain d4ivpb_: 4ivp B: [223429]
      automated match to d1e2ka_
      protein/DNA complex; complexed with i51, so4

      has additional subdomain(s) that are not in the common domain
  26. Domain(s) for 4ivq:
    1. 2866117Domain d4ivqa_: 4ivq A: [223430]
      automated match to d1e2ka_
      protein/DNA complex; complexed with i43, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866118Domain d4ivqb_: 4ivq B: [223431]
      automated match to d1e2ka_
      protein/DNA complex; complexed with i43, so4

      has additional subdomain(s) that are not in the common domain
  27. Domain(s) for 4ivr:
    1. 2866141Domain d4ivra_: 4ivr A: [223432]
      automated match to d1e2ka_
      protein/DNA complex; complexed with n50, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866142Domain d4ivrb_: 4ivr B: [223433]
      automated match to d1e2ka_
      protein/DNA complex; complexed with n50, so4

      has additional subdomain(s) that are not in the common domain
  28. Domain(s) for 4jbx:
    1. 2866089Domain d4jbxa_: 4jbx A: [193223]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edo, sk7, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866090Domain d4jbxb_: 4jbx B: [202730]
      automated match to d3f0tb_
      protein/DNA complex; complexed with edo, sk7, so4

      has additional subdomain(s) that are not in the common domain
  29. Domain(s) for 4jby:
    1. 2866085Domain d4jbya_: 4jby A: [202731]
      automated match to d4jbxa_
      protein/DNA complex; complexed with edo, fsk, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866086Domain d4jbyb_: 4jby B: [193222]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edo, fsk, so4

      has additional subdomain(s) that are not in the common domain
  30. Domain(s) for 4oql:
    1. 2866107Domain d4oqla_: 4oql A: [258958]
      automated match to d1p7cb_
      protein/DNA complex; complexed with f2u, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866108Domain d4oqlb_: 4oql B: [258960]
      automated match to d1p7cb_
      protein/DNA complex; complexed with f2u, so4

      has additional subdomain(s) that are not in the common domain
  31. Domain(s) for 4oqm:
    1. 2866115Domain d4oqma_: 4oqm A: [258965]
      automated match to d1p7cb_
      protein/DNA complex; complexed with fdu, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866116Domain d4oqmb_: 4oqm B: [258962]
      automated match to d1p7cb_
      protein/DNA complex; complexed with fdu, so4

      has additional subdomain(s) that are not in the common domain
  32. Domain(s) for 4oqn:
    1. 2866133Domain d4oqna_: 4oqn A: [258961]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edu, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866134Domain d4oqnb_: 4oqn B: [258963]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edu, so4

      has additional subdomain(s) that are not in the common domain
  33. Domain(s) for 4oqx:
    1. 2866146Domain d4oqxa_: 4oqx A: [258957]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edv, so4

      has additional subdomain(s) that are not in the common domain
    2. 2866147Domain d4oqxb_: 4oqx B: [258959]
      automated match to d1p7cb_
      protein/DNA complex; complexed with edv, so4

      has additional subdomain(s) that are not in the common domain

More info for Species Herpes simplex virus type 1, different strains [TaxId:10298] from c.37.1.1 Thymidine kinase

Timeline for Species Herpes simplex virus type 1, different strains [TaxId:10298] from c.37.1.1 Thymidine kinase: