Lineage for Protein: Thymidine kinase

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2109203Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 2109204Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families) (S)
    division into families based on beta-sheet topologies
  5. 2109205Family c.37.1.1: Nucleotide and nucleoside kinases [52541] (21 protein domains)
    parallel beta-sheet of 5 strands, order 23145
  6. 2109585Protein Thymidine kinase [52552] (4 species)
    contains insert all-alpha subdomain, res. 251-322

Species:

  1. 2109586Equine herpesvirus type 4 [TaxId:10331] [102340] (4 PDB entries)
    1. Domains for 1p6x:
      1. 2109587Domain d1p6xa1: 1p6x A:23-352 [94195]
        Other proteins in same PDB: d1p6xa2, d1p6xb2
        complexed with so4, thm
      2. 2109588Domain d1p6xb1: 1p6x B:23-351 [94196]
        Other proteins in same PDB: d1p6xa2, d1p6xb2
        complexed with so4, thm
    2. Domains for 1p72:
      1. 2109589Domain d1p72a1: 1p72 A:23-352 [94200]
        Other proteins in same PDB: d1p72a2, d1p72b2
        complexed with adp, so4, thm
      2. 2109590Domain d1p72b1: 1p72 B:23-352 [94201]
        Other proteins in same PDB: d1p72a2, d1p72b2
        complexed with adp, so4, thm
    3. Domains for 1p73:
      1. 2109591Domain d1p73a1: 1p73 A:23-352 [94202]
        Other proteins in same PDB: d1p73a2, d1p73b2, d1p73c2, d1p73d2
        complexed with 4ta, so4
      2. 2109592Domain d1p73b1: 1p73 B:23-352 [94203]
        Other proteins in same PDB: d1p73a2, d1p73b2, d1p73c2, d1p73d2
        complexed with 4ta, so4
      3. 2109593Domain d1p73c1: 1p73 C:23-352 [94204]
        Other proteins in same PDB: d1p73a2, d1p73b2, d1p73c2, d1p73d2
        complexed with 4ta, so4
      4. 2109594Domain d1p73d1: 1p73 D:23-352 [94205]
        Other proteins in same PDB: d1p73a2, d1p73b2, d1p73c2, d1p73d2
        complexed with 4ta, so4
    4. Domains for 1p75:
      1. 2109595Domain d1p75a1: 1p75 A:23-352 [94210]
        Other proteins in same PDB: d1p75a2, d1p75b2, d1p75c2, d1p75d2
        complexed with so4, t5a
      2. 2109596Domain d1p75b1: 1p75 B:23-352 [94211]
        Other proteins in same PDB: d1p75a2, d1p75b2, d1p75c2, d1p75d2
        complexed with so4, t5a
      3. 2109597Domain d1p75c1: 1p75 C:23-352 [94212]
        Other proteins in same PDB: d1p75a2, d1p75b2, d1p75c2, d1p75d2
        complexed with so4, t5a
      4. 2109598Domain d1p75d1: 1p75 D:23-352 [94213]
        Other proteins in same PDB: d1p75a2, d1p75b2, d1p75c2, d1p75d2
        complexed with so4, t5a
  2. 2109599Herpes simplex virus type 1, different strains [TaxId:10298] [52553] (33 PDB entries)
    Uniprot P03176 46-375
    1. Domains for 1e2h:
      1. 2109608Domain d1e2ha_: 1e2h A: [31856]
        complexed with so4
      2. 2109609Domain d1e2hb_: 1e2h B: [31857]
        complexed with so4
    2. Domains for 1e2i:
      1. 2109616Domain d1e2ia_: 1e2i A: [31858]
        complexed with aps, arp, so4
      2. 2109617Domain d1e2ib_: 1e2i B: [31859]
        complexed with aps, arp, so4
    3. Domains for 1e2j:
      1. 2109646Domain d1e2ja_: 1e2j A: [31874]
        complexed with so4, thm
      2. 2109647Domain d1e2jb_: 1e2j B: [31875]
        complexed with so4, thm
    4. Domains for 1e2k:
      1. 2109600Domain d1e2ka_: 1e2k A: [31854]
        complexed with so4, tmc; mutant
      2. 2109601Domain d1e2kb_: 1e2k B: [31855]
        complexed with so4, tmc; mutant
    5. Domains for 1e2l:
      1. 2109642Domain d1e2la_: 1e2l A: [31872]
        complexed with so4, tmc; mutant
      2. 2109643Domain d1e2lb_: 1e2l B: [31873]
        complexed with so4, tmc; mutant
    6. Domains for 1e2m:
      1. 2109624Domain d1e2ma_: 1e2m A: [59166]
        complexed with hpt, so4
      2. 2109625Domain d1e2mb_: 1e2m B: [59167]
        complexed with hpt, so4
    7. Domains for 1e2n:
      1. 2109622Domain d1e2na_: 1e2n A: [59168]
        complexed with rca, so4
      2. 2109623Domain d1e2nb_: 1e2n B: [59169]
        complexed with rca, so4
    8. Domains for 1e2p:
      1. 2109644Domain d1e2pa_: 1e2p A: [59170]
        complexed with ccv, so4
      2. 2109645Domain d1e2pb_: 1e2p B: [59171]
        complexed with ccv, so4
    9. Domains for 1ki2:
      1. 2109636Domain d1ki2a_: 1ki2 A: [31870]
        protein/DNA complex; complexed with ga2, so4
      2. 2109637Domain d1ki2b_: 1ki2 B: [31871]
        protein/DNA complex; complexed with ga2, so4
    10. Domains for 1ki3:
      1. 2109654Domain d1ki3a_: 1ki3 A: [31880]
        protein/DNA complex; complexed with pe2, so4
      2. 2109655Domain d1ki3b_: 1ki3 B: [31881]
        protein/DNA complex; complexed with pe2, so4
    11. Domains for 1ki4:
      1. 2109650Domain d1ki4a_: 1ki4 A: [31878]
        protein/DNA complex; complexed with btd, so4
      2. 2109651Domain d1ki4b_: 1ki4 B: [31879]
        protein/DNA complex; complexed with btd, so4
    12. Domains for 1ki6:
      1. 2109648Domain d1ki6a_: 1ki6 A: [31876]
        protein/DNA complex; complexed with ahu, so4
      2. 2109649Domain d1ki6b_: 1ki6 B: [31877]
        protein/DNA complex; complexed with ahu, so4
    13. Domains for 1ki7:
      1. 2109632Domain d1ki7a_: 1ki7 A: [31868]
        protein/DNA complex; complexed with id2, so4
      2. 2109633Domain d1ki7b_: 1ki7 B: [31869]
        protein/DNA complex; complexed with id2, so4
    14. Domains for 1ki8:
      1. 2109628Domain d1ki8a_: 1ki8 A: [31866]
        protein/DNA complex; complexed with bvd, so4
      2. 2109629Domain d1ki8b_: 1ki8 B: [31867]
        protein/DNA complex; complexed with bvd, so4
    15. Domains for 1kim:
      1. 2109626Domain d1kima_: 1kim A: [31864]
        protein/DNA complex; complexed with so4, thm
      2. 2109627Domain d1kimb_: 1kim B: [31865]
        protein/DNA complex; complexed with so4, thm
    16. Domains for 1of1:
      1. 2109604Domain d1of1a_: 1of1 A: [103924]
        complexed with sct, so4
      2. 2109605Domain d1of1b_: 1of1 B: [103925]
        complexed with sct, so4
    17. Domains for 1p7c:
      1. 2109634Domain d1p7ca_: 1p7c A: [94217]
        complexed with so4, t5a, thm
      2. 2109635Domain d1p7cb_: 1p7c B: [94218]
        complexed with so4, t5a, thm
    18. Domains for 1qhi:
      1. 2109618Domain d1qhia_: 1qhi A: [31860]
        protein/DNA complex; complexed with bpg, so4
      2. 2109619Domain d1qhib_: 1qhi B: [31861]
        protein/DNA complex; complexed with bpg, so4
    19. Domain for 1vtk:
    20. Domains for 2ki5:
      1. 2109620Domain d2ki5a_: 2ki5 A: [31862]
        protein/DNA complex; complexed with ac2, so4
      2. 2109621Domain d2ki5b_: 2ki5 B: [31863]
        protein/DNA complex; complexed with ac2, so4
    21. Domain for 2vtk:
    22. Domains for 3f0t:
      1. 2109610Domain d3f0ta_: 3f0t A: [175383]
        automated match to d1p7cb_
        protein/DNA complex; complexed with ncv, so4
      2. 2109611Domain d3f0tb_: 3f0t B: [175384]
        automated match to d1p7cb_
        protein/DNA complex; complexed with ncv, so4
    23. Domains for 3rdp:
      1. 2109657Domain d3rdpa_: 3rdp A: [200468]
        automated match to d1e2ka_
        protein/DNA complex; complexed with nmf, so4
      2. 2109658Domain d3rdpb_: 3rdp B: [193674]
        automated match to d1p7cb_
        protein/DNA complex; complexed with nmf, so4
    24. Domain for 3vtk:
    25. Domains for 4ivp:
      1. 2109614Domain d4ivpa_: 4ivp A: [223428]
        automated match to d1e2ka_
        protein/DNA complex; complexed with i51, so4
      2. 2109615Domain d4ivpb_: 4ivp B: [223429]
        automated match to d1e2ka_
        protein/DNA complex; complexed with i51, so4
    26. Domains for 4ivq:
      1. 2109602Domain d4ivqa_: 4ivq A: [223430]
        automated match to d1e2ka_
        protein/DNA complex; complexed with i43, so4
      2. 2109603Domain d4ivqb_: 4ivq B: [223431]
        automated match to d1e2ka_
        protein/DNA complex; complexed with i43, so4
    27. Domains for 4ivr:
      1. 2109640Domain d4ivra_: 4ivr A: [223432]
        automated match to d1e2ka_
        protein/DNA complex; complexed with n50, so4
      2. 2109641Domain d4ivrb_: 4ivr B: [223433]
        automated match to d1e2ka_
        protein/DNA complex; complexed with n50, so4
    28. Domains for 4jbx:
      1. 2109612Domain d4jbxa_: 4jbx A: [193223]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edo, sk7, so4
      2. 2109613Domain d4jbxb_: 4jbx B: [202730]
        automated match to d3f0tb_
        protein/DNA complex; complexed with edo, sk7, so4
    29. Domains for 4jby:
      1. 2109606Domain d4jbya_: 4jby A: [202731]
        automated match to d4jbxa_
        protein/DNA complex; complexed with edo, fsk, so4
      2. 2109607Domain d4jbyb_: 4jby B: [193222]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edo, fsk, so4
    30. Domains for 4oql:
      1. 2109630Domain d4oqla_: 4oql A: [258958]
        automated match to d1p7cb_
        protein/DNA complex; complexed with f2u, so4
      2. 2109631Domain d4oqlb_: 4oql B: [258960]
        automated match to d1p7cb_
        protein/DNA complex; complexed with f2u, so4
    31. Domains for 4oqm:
      1. 2109638Domain d4oqma_: 4oqm A: [258965]
        automated match to d1p7cb_
        protein/DNA complex; complexed with fdu, so4
      2. 2109639Domain d4oqmb_: 4oqm B: [258962]
        automated match to d1p7cb_
        protein/DNA complex; complexed with fdu, so4
    32. Domains for 4oqn:
      1. 2109652Domain d4oqna_: 4oqn A: [258961]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edu, so4
      2. 2109653Domain d4oqnb_: 4oqn B: [258963]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edu, so4
    33. Domains for 4oqx:
      1. 2109660Domain d4oqxa_: 4oqx A: [258957]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edv, so4
      2. 2109661Domain d4oqxb_: 4oqx B: [258959]
        automated match to d1p7cb_
        protein/DNA complex; complexed with edv, so4
  3. 2109663Herpes simplex virus type i [311159] (1 PDB entry)
  4. 2109665Varicella-Zoster virus [TaxId:10335] [89659] (1 PDB entry)

More info for Protein Thymidine kinase from c.37.1.1: Nucleotide and nucleoside kinases

Timeline for Protein Thymidine kinase from c.37.1.1: Nucleotide and nucleoside kinases: