Lineage for Species: Baker's yeast (Saccharomyces cerevisiae)

  1. Root: SCOP 1.63
  2. 235644Class c: Alpha and beta proteins (a/b) [51349] (117 folds)
  3. 242757Fold c.36: Thiamin diphosphate-binding fold (THDP-binding) [52517] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 213465
  4. 242758Superfamily c.36.1: Thiamin diphosphate-binding fold (THDP-binding) [52518] (4 families) (S)
    both pyridine (Pyr)- and pyrophosphate (PP)-binding modules have this fold
    conserved core consists of two Pyr and two PP-modules and binds two coenzyme molecules
  5. 242759Family c.36.1.1: Pyruvate oxidase and decarboxylase THDP-binding domains [52519] (4 proteins)
    the N-terminal, Pyr module is separated from the C-terminal, PP module by an alpa/beta domain of Rossmann-like topology
  6. 242806Protein Pyruvate decarboxylase [52520] (3 species)
  7. 242807Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [52522] (2 PDB entries)

PDB entries in Species: Baker's yeast (Saccharomyces cerevisiae):

  1. Domain(s) for 1pvd:
    1. 242808Domain d1pvda2: 1pvd A:2-181 [31777]
      Other proteins in same PDB: d1pvda1, d1pvdb1
    2. 242809Domain d1pvda3: 1pvd A:361-556 [31778]
      Other proteins in same PDB: d1pvda1, d1pvdb1
    3. 242810Domain d1pvdb2: 1pvd B:2-181 [31779]
      Other proteins in same PDB: d1pvda1, d1pvdb1
    4. 242811Domain d1pvdb3: 1pvd B:361-556 [31780]
      Other proteins in same PDB: d1pvda1, d1pvdb1
      complexed with mg, tpp
  2. Domain(s) for 1qpb:
    1. 242812Domain d1qpba2: 1qpb A:2-181 [31781]
      Other proteins in same PDB: d1qpba1, d1qpbb1
    2. 242813Domain d1qpba3: 1qpb A:361-556 [31782]
      Other proteins in same PDB: d1qpba1, d1qpbb1
    3. 242814Domain d1qpbb2: 1qpb B:2-181 [31783]
      Other proteins in same PDB: d1qpba1, d1qpbb1
    4. 242815Domain d1qpbb3: 1qpb B:361-556 [31784]
      Other proteins in same PDB: d1qpba1, d1qpbb1

More info for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from c.36.1.1 Pyruvate decarboxylase

Timeline for Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] from c.36.1.1 Pyruvate decarboxylase: