Lineage for Protein: Tubulin beta-subunit

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2107739Fold c.32: Tubulin nucleotide-binding domain-like [52489] (1 superfamily)
    3 layers: a/b/a; parallel beta-sheet of 6 strands, order 321456
  4. 2107740Superfamily c.32.1: Tubulin nucleotide-binding domain-like [52490] (2 families) (S)
    automatically mapped to Pfam PF00091
  5. 2107741Family c.32.1.1: Tubulin, GTPase domain [52491] (4 protein domains)
  6. 2107836Protein Tubulin beta-subunit [52496] (2 species)

Species:

  1. 2107837Cow (Bos taurus) [TaxId:9913] [63990] (11 PDB entries)
    Uniprot P02550 ! Uniprot P02554
    1. Domain for 1jff:
    2. Domains for 1sa0:
      1. 2107839Domain d1sa0b1: 1sa0 B:2-245 [98771]
        Other proteins in same PDB: d1sa0a1, d1sa0a2, d1sa0b2, d1sa0c1, d1sa0c2, d1sa0d2, d1sa0e1, d1sa0e2
        complexed with cn2, gdp, gtp, mg
      2. 2107840Domain d1sa0d1: 1sa0 D:2-245 [98775]
        Other proteins in same PDB: d1sa0a1, d1sa0a2, d1sa0b2, d1sa0c1, d1sa0c2, d1sa0d2, d1sa0e1, d1sa0e2
        complexed with cn2, gdp, gtp, mg
    3. Domains for 1sa1:
      1. 2107843Domain d1sa1b1: 1sa1 B:2-245 [98780]
        Other proteins in same PDB: d1sa1a1, d1sa1a2, d1sa1b2, d1sa1c1, d1sa1c2, d1sa1d2, d1sa1e_
        complexed with gdp, gtp, mg, pod
      2. 2107844Domain d1sa1d1: 1sa1 D:2-245 [98784]
        Other proteins in same PDB: d1sa1a1, d1sa1a2, d1sa1b2, d1sa1c1, d1sa1c2, d1sa1d2, d1sa1e_
        complexed with gdp, gtp, mg, pod
    4. Domains for 1tvk:
      1. 2107845Domain d1tvka1: 1tvk A:2-245 [107362]
        Other proteins in same PDB: d1tvka2, d1tvkb2
        complexed with ep, gdp, gtp
      2. 2107846Domain d1tvkb1: 1tvk B:2-245 [107364]
        Other proteins in same PDB: d1tvka2, d1tvkb2
        complexed with ep, gdp, gtp
    5. Domains for 1z2b:
      1. 2107841Domain d1z2bb1: 1z2b B:2-245 [144727]
        Other proteins in same PDB: d1z2ba1, d1z2ba2, d1z2bb2, d1z2bc1, d1z2bc2, d1z2bd2, d1z2be1, d1z2be2
        complexed with cn2, gdp, gtp, mg, vlb
      2. 2107842Domain d1z2bd1: 1z2b D:2-245 [144731]
        Other proteins in same PDB: d1z2ba1, d1z2ba2, d1z2bb2, d1z2bc1, d1z2bc2, d1z2bd2, d1z2be1, d1z2be2
        automatically matched to 1Z2B B:2-245
        complexed with cn2, gdp, gtp, mg, vlb
    6. Domains for 4zhq:
      1. 2276878Domain d4zhqd1: 4zhq D:1-245 [320179]
        Other proteins in same PDB: d4zhqa1, d4zhqa2, d4zhqb2, d4zhqc1, d4zhqc2, d4zhqd2, d4zhqe_, d4zhqf1, d4zhqf2, d4zhqf3
        automated match to d1sa0b1
        complexed with 4q5, acp, ca, gdp, gol, gtp, mes, mg
      2. 2276929Domain d4zhqb1: 4zhq B:1-245 [320230]
        Other proteins in same PDB: d4zhqa1, d4zhqa2, d4zhqb2, d4zhqc1, d4zhqc2, d4zhqd2, d4zhqe_, d4zhqf1, d4zhqf2, d4zhqf3
        automated match to d1sa0b1
        complexed with 4q5, acp, ca, gdp, gol, gtp, mes, mg
    7. Domains for 4zi7:
      1. 2276862Domain d4zi7b1: 4zi7 B:1-245 [320163]
        Other proteins in same PDB: d4zi7a1, d4zi7a2, d4zi7b2, d4zi7c1, d4zi7c2, d4zi7d2, d4zi7e_, d4zi7f1, d4zi7f2, d4zi7f3
        automated match to d1sa0b1
        complexed with 4sl, acp, ca, gdp, gol, gtp, mes, mg
      2. 2276867Domain d4zi7d1: 4zi7 D:1-245 [320168]
        Other proteins in same PDB: d4zi7a1, d4zi7a2, d4zi7b2, d4zi7c1, d4zi7c2, d4zi7d2, d4zi7e_, d4zi7f1, d4zi7f2, d4zi7f3
        automated match to d1sa0b1
        complexed with 4sl, acp, ca, gdp, gol, gtp, mes, mg
    8. Domains for 4zol:
      1. 2276894Domain d4zolb1: 4zol B:1-245 [320195]
        Other proteins in same PDB: d4zola1, d4zola2, d4zolb2, d4zolc1, d4zolc2, d4zold2, d4zole_, d4zolf1, d4zolf2, d4zolf3
        automated match to d1sa0b1
        complexed with 55q, acp, ca, gdp, gol, gtp, mes, mg
      2. 2276921Domain d4zold1: 4zol D:1-245 [320222]
        Other proteins in same PDB: d4zola1, d4zola2, d4zolb2, d4zolc1, d4zolc2, d4zold2, d4zole_, d4zolf1, d4zolf2, d4zolf3
        automated match to d1sa0b1
        complexed with 55q, acp, ca, gdp, gol, gtp, mes, mg
    9. Domains for 5bmv:
      1. 2276206Domain d5bmvd1: 5bmv D:1-245 [319507]
        Other proteins in same PDB: d5bmva1, d5bmva2, d5bmvb2, d5bmvc1, d5bmvc2, d5bmvd2, d5bmve_, d5bmvf1, d5bmvf2, d5bmvf3
        automated match to d1sa0b1
        complexed with acp, ca, gdp, gol, gtp, mes, mg, vlb
      2. 2276359Domain d5bmvb1: 5bmv B:1-245 [319660]
        Other proteins in same PDB: d5bmva1, d5bmva2, d5bmvb2, d5bmvc1, d5bmvc2, d5bmvd2, d5bmve_, d5bmvf1, d5bmvf2, d5bmvf3
        automated match to d1sa0b1
        complexed with acp, ca, gdp, gol, gtp, mes, mg, vlb
    10. Domains for 5fnv:
      1. 2274148Domain d5fnvb1: 5fnv B:2-243 [317449]
        Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb2, d5fnvc1, d5fnvc2, d5fnvd2, d5fnve_, d5fnvf1, d5fnvf2
        automated match to d1sa0b1
        complexed with acp, ca, gdp, gtp, mes, mg, x3h
      2. 2274151Domain d5fnvd1: 5fnv D:2-243 [317452]
        Other proteins in same PDB: d5fnva1, d5fnva2, d5fnvb2, d5fnvc1, d5fnvc2, d5fnvd2, d5fnve_, d5fnvf1, d5fnvf2
        automated match to d1sa0b1
        complexed with acp, ca, gdp, gtp, mes, mg, x3h
    11. Domains for 5jqg:
      1. 2274282Domain d5jqgd1: 5jqg D:2-243 [317583]
        Other proteins in same PDB: d5jqga1, d5jqga2, d5jqgb2, d5jqgc1, d5jqgc2, d5jqgd2, d5jqge_, d5jqgf1, d5jqgf2
        automated match to d1sa0b1
        complexed with acp, ca, cl, gdp, gtp, mes, mg
      2. 2274289Domain d5jqgb1: 5jqg B:2-243 [317590]
        Other proteins in same PDB: d5jqga1, d5jqga2, d5jqgb2, d5jqgc1, d5jqgc2, d5jqgd2, d5jqge_, d5jqgf1, d5jqgf2
        automated match to d1sa0b1
        complexed with acp, ca, cl, gdp, gtp, mes, mg
  2. 2107847Pig (Sus scrofa) [TaxId:9823] [52497] (3 PDB entries)
    1. Domain for 1tub:
    2. Domain for 2hxf:
    3. Domain for 2hxh:

More info for Protein Tubulin beta-subunit from c.32.1.1: Tubulin, GTPase domain

Timeline for Protein Tubulin beta-subunit from c.32.1.1: Tubulin, GTPase domain: