SCOPe 2.07: Species: Escherichia coli [TaxId: 562]

Lineage for Species: Escherichia coli [TaxId: 562]

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
possible rudiment form of Rossmann-fold domain
Superfamily c.30.1: PreATP-grasp domain [52440] (10 families)
precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function
Family c.30.1.1: BC N-terminal domain-like [52441] (6 protein domains)
Protein Biotin carboxylase (BC), N-terminal domain [52442] (2 species)
subunit of acetyl-CoA and pyruvate carboxylases
Species Escherichia coli [TaxId:562] [52443] (24 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

Domain(s) for 1bnc:
1. Domain d1bnca2: 1bnc A:1-114 [31643]
  Other proteins in same PDB: d1bnca1, d1bnca3, d1bncb1, d1bncb3
  complexed with po4
2. Domain d1bncb2: 1bnc B:1-114 [31644]
  Other proteins in same PDB: d1bnca1, d1bnca3, d1bncb1, d1bncb3
  complexed with po4
Domain(s) for 1dv1:
1. Domain d1dv1a2: 1dv1 A:1-114 [31641]
  Other proteins in same PDB: d1dv1a1, d1dv1a3, d1dv1b1, d1dv1b3
  complexed with po4
2. Domain d1dv1b2: 1dv1 B:1-114 [31642]
  Other proteins in same PDB: d1dv1a1, d1dv1a3, d1dv1b1, d1dv1b3
  complexed with po4
Domain(s) for 1dv2:
1. Domain d1dv2a2: 1dv2 A:1-114 [31645]
  Other proteins in same PDB: d1dv2a1, d1dv2a3, d1dv2a4, d1dv2b1, d1dv2b3, d1dv2b4
  complexed with atp; mutant
2. Domain d1dv2b2: 1dv2 B:1-114 [31646]
  Other proteins in same PDB: d1dv2a1, d1dv2a3, d1dv2a4, d1dv2b1, d1dv2b3, d1dv2b4
  complexed with atp; mutant
Domain(s) for 2gps:
1. Domain d2gpsa2: 2gps A:1-114 [135488]
  Other proteins in same PDB: d2gpsa1, d2gpsa3, d2gpsa4, d2gpsb1, d2gpsb3, d2gpsb4
  automated match to d2gpwa2
  mutant
2. Domain d2gpsb2: 2gps B:1-114 [135491]
  Other proteins in same PDB: d2gpsa1, d2gpsa3, d2gpsa4, d2gpsb1, d2gpsb3, d2gpsb4
  automated match to d2gpwa2
  mutant

Domain(s) for 2gpw:

Domain d2gpwa2: 2gpw A:1-114 [135498]
Other proteins in same PDB: d2gpwa1, d2gpwa3, d2gpwa4, d2gpwb1, d2gpwb3, d2gpwb4, d2gpwc1, d2gpwc3, d2gpwc4, d2gpwd1, d2gpwd3, d2gpwd4
automated match to d2gpwa2
mutant

Domain d2gpwb2: 2gpw B:1-114 [135501]
Other proteins in same PDB: d2gpwa1, d2gpwa3, d2gpwa4, d2gpwb1, d2gpwb3, d2gpwb4, d2gpwc1, d2gpwc3, d2gpwc4, d2gpwd1, d2gpwd3, d2gpwd4
automated match to d2gpwa2
mutant

Domain d2gpwc2: 2gpw C:1-114 [135504]
Other proteins in same PDB: d2gpwa1, d2gpwa3, d2gpwa4, d2gpwb1, d2gpwb3, d2gpwb4, d2gpwc1, d2gpwc3, d2gpwc4, d2gpwd1, d2gpwd3, d2gpwd4
automated match to d2gpwc2
mutant

Domain d2gpwd2: 2gpw D:1-114 [135507]
Other proteins in same PDB: d2gpwa1, d2gpwa3, d2gpwa4, d2gpwb1, d2gpwb3, d2gpwb4, d2gpwc1, d2gpwc3, d2gpwc4, d2gpwd1, d2gpwd3, d2gpwd4
automated match to d2gpwc2
mutant

Domain(s) for 2j9g:
1. Domain d2j9ga2: 2j9g A:1-114 [147938]
  Other proteins in same PDB: d2j9ga1, d2j9ga3, d2j9gb1, d2j9gb3
  automated match to d1dv1a2
  complexed with adp, anp, mg, so4
2. Domain d2j9gb2: 2j9g B:1-114 [147941]
  Other proteins in same PDB: d2j9ga1, d2j9ga3, d2j9gb1, d2j9gb3
  automated match to d1dv1b2
  complexed with adp, anp, mg, so4
Domain(s) for 2v58:
1. Domain d2v58a1: 2v58 A:1-114 [206211]
  Other proteins in same PDB: d2v58a2, d2v58a3, d2v58b2, d2v58b3
  automated match to d1dv1b2
  complexed with cl, lzj
2. Domain d2v58b1: 2v58 B:1-114 [206214]
  Other proteins in same PDB: d2v58a2, d2v58a3, d2v58b2, d2v58b3
  automated match to d1dv1a2
  complexed with cl, lzj
Domain(s) for 2v59:
1. Domain d2v59a1: 2v59 A:1-114 [206217]
  Other proteins in same PDB: d2v59a2, d2v59a3, d2v59b2, d2v59b3
  automated match to d1dv1a2
  complexed with lzk
2. Domain d2v59b1: 2v59 B:1-114 [206220]
  Other proteins in same PDB: d2v59a2, d2v59a3, d2v59b2, d2v59b3
  automated match to d1dv1a2
  complexed with lzk
Domain(s) for 2v5a:
1. Domain d2v5aa1: 2v5a A:1-114 [206223]
  Other proteins in same PDB: d2v5aa2, d2v5aa3, d2v5ab2, d2v5ab3
  automated match to d1dv1b2
  complexed with cl, lzl
2. Domain d2v5ab1: 2v5a B:1-114 [206226]
  Other proteins in same PDB: d2v5aa2, d2v5aa3, d2v5ab2, d2v5ab3
  automated match to d1dv1a2
  complexed with cl, lzl
Domain(s) for 2vr1:
1. Domain d2vr1a2: 2vr1 A:1-114 [153490]
  Other proteins in same PDB: d2vr1a1, d2vr1a3, d2vr1b1, d2vr1b3
  automated match to d1dv1a2
  complexed with atf, cl
2. Domain d2vr1b2: 2vr1 B:1-114 [153493]
  Other proteins in same PDB: d2vr1a1, d2vr1a3, d2vr1b1, d2vr1b3
  automated match to d1dv1a2
  complexed with atf, cl
Domain(s) for 2w6m:
1. Domain d2w6ma1: 2w6m A:1-114 [206642]
  Other proteins in same PDB: d2w6ma2, d2w6ma3, d2w6mb2, d2w6mb3
  automated match to d1dv1b2
  complexed with cl, oa1
2. Domain d2w6mb1: 2w6m B:1-114 [206645]
  Other proteins in same PDB: d2w6ma2, d2w6ma3, d2w6mb2, d2w6mb3
  automated match to d1dv1a2
  complexed with cl, oa1
Domain(s) for 2w6n:
1. Domain d2w6na1: 2w6n A:1-114 [206648]
  Other proteins in same PDB: d2w6na2, d2w6na3, d2w6nb2, d2w6nb3
  automated match to d1dv1a2
  complexed with cl, oa2
2. Domain d2w6nb1: 2w6n B:1-114 [206651]
  Other proteins in same PDB: d2w6na2, d2w6na3, d2w6nb2, d2w6nb3
  automated match to d1dv1a2
  complexed with cl, oa2
Domain(s) for 2w6o:
1. Domain d2w6oa1: 2w6o A:1-114 [206654]
  Other proteins in same PDB: d2w6oa2, d2w6oa3, d2w6oc2, d2w6oc3
  automated match to d1dv1a2
  complexed with cl, oa3
2. Domain d2w6oc1: 2w6o C:1-114 [206657]
  Other proteins in same PDB: d2w6oa2, d2w6oa3, d2w6oc2, d2w6oc3
  automated match to d1dv1a2
  complexed with cl, oa3
Domain(s) for 2w6p:
1. Domain d2w6pa1: 2w6p A:1-114 [206660]
  Other proteins in same PDB: d2w6pa2, d2w6pa3, d2w6pb2, d2w6pb3
  automated match to d1dv1a2
  complexed with oa4
2. Domain d2w6pb1: 2w6p B:1-114 [206663]
  Other proteins in same PDB: d2w6pa2, d2w6pa3, d2w6pb2, d2w6pb3
  automated match to d1dv1a2
  complexed with oa4
Domain(s) for 2w6q:
1. Domain d2w6qa1: 2w6q A:1-114 [206666]
  Other proteins in same PDB: d2w6qa2, d2w6qa3, d2w6qb2, d2w6qb3
  automated match to d1dv1b2
  complexed with cl, oa5
2. Domain d2w6qb1: 2w6q B:1-114 [206669]
  Other proteins in same PDB: d2w6qa2, d2w6qa3, d2w6qb2, d2w6qb3
  automated match to d1dv1a2
  complexed with cl, oa5
Domain(s) for 2w6z:
1. Domain d2w6za1: 2w6z A:1-114 [206672]
  Other proteins in same PDB: d2w6za2, d2w6za3, d2w6zb2, d2w6zb3
  automated match to d1dv1b2
  complexed with cl, l21
2. Domain d2w6zb1: 2w6z B:1-114 [206675]
  Other proteins in same PDB: d2w6za2, d2w6za3, d2w6zb2, d2w6zb3
  automated match to d1dv1a2
  complexed with cl, l21
Domain(s) for 2w70:
1. Domain d2w70a1: 2w70 A:1-114 [206678]
  Other proteins in same PDB: d2w70a2, d2w70a3, d2w70b2, d2w70b3
  automated match to d1dv1a2
  complexed with cl, l22
2. Domain d2w70b1: 2w70 B:1-114 [206681]
  Other proteins in same PDB: d2w70a2, d2w70a3, d2w70b2, d2w70b3
  automated match to d1dv1a2
  complexed with cl, l22
Domain(s) for 2w71:
1. Domain d2w71a1: 2w71 A:1-114 [206684]
  Other proteins in same PDB: d2w71a2, d2w71a3, d2w71c2, d2w71c3
  automated match to d1dv1b2
  complexed with cl, l23
2. Domain d2w71c1: 2w71 C:1-114 [206687]
  Other proteins in same PDB: d2w71a2, d2w71a3, d2w71c2, d2w71c3
  automated match to d1dv1b2
  complexed with cl, l23
Domain(s) for 3jzf:
1. Domain d3jzfa1: 3jzf A:1-114 [247074]
  Other proteins in same PDB: d3jzfa2, d3jzfb2, d3jzfb3, d3jzfb4
  automated match to d1dv2a2
  complexed with co3, jzk
2. Domain d3jzfb1: 3jzf B:1-114 [247076]
  Other proteins in same PDB: d3jzfa2, d3jzfb2, d3jzfb3, d3jzfb4
  automated match to d1dv2a2
  complexed with co3, jzk
Domain(s) for 3jzi:
1. Domain d3jzia1: 3jzi A:1-114 [247079]
  Other proteins in same PDB: d3jzia2, d3jzia3, d3jzib2, d3jzib3, d3jzib4
  automated match to d1dv2a2
  complexed with jzl
2. Domain d3jzib1: 3jzi B:1-114 [247082]
  Other proteins in same PDB: d3jzia2, d3jzia3, d3jzib2, d3jzib3, d3jzib4
  automated match to d1dv2a2
  complexed with jzl
Domain(s) for 3rup:
1. Domain d3rupa1: 3rup A:2-114 [249211]
  Other proteins in same PDB: d3rupa2, d3rupa3, d3rupa4, d3rupb2, d3rupb3, d3rupb4
  automated match to d1dv2a2
  complexed with adp, ca, cl
2. Domain d3rupb1: 3rup B:2-114 [249214]
  Other proteins in same PDB: d3rupa2, d3rupa3, d3rupa4, d3rupb2, d3rupb3, d3rupb4
  automated match to d1dv2a2
  complexed with adp, ca, cl
Domain(s) for 3rv3:
1. Domain d3rv3a1: 3rv3 A:1C-114 [249227]
  Other proteins in same PDB: d3rv3a2, d3rv3a3, d3rv3b2, d3rv3b3, d3rv3b4
  automated match to d1dv2a2
  complexed with adp, mg
2. Domain d3rv3b1: 3rv3 B:2-114 [249230]
  Other proteins in same PDB: d3rv3a2, d3rv3a3, d3rv3b2, d3rv3b3, d3rv3b4
  automated match to d1dv2a2
  complexed with adp, mg
Domain(s) for 3rv4:
- Domain d3rv4a1: 3rv4 A:2-114 [249233]
  Other proteins in same PDB: d3rv4a2, d3rv4a3, d3rv4a4
  automated match to d1dv2a2
  complexed with adp, bct, cl, cs, gol, mg, moh, na; mutant

Domain(s) for 4hr7:

Domain d4hr7a1: 4hr7 A:1-114 [222720]
Other proteins in same PDB: d4hr7a2, d4hr7a3, d4hr7b_, d4hr7c2, d4hr7c3, d4hr7d_, d4hr7e2, d4hr7e3, d4hr7f2, d4hr7f3, d4hr7g_, d4hr7i_
automated match to d1dv1a2
complexed with edo, so4

Domain d4hr7c1: 4hr7 C:1-114 [222723]
Other proteins in same PDB: d4hr7a2, d4hr7a3, d4hr7b_, d4hr7c2, d4hr7c3, d4hr7d_, d4hr7e2, d4hr7e3, d4hr7f2, d4hr7f3, d4hr7g_, d4hr7i_
automated match to d1dv1a2
complexed with edo, so4

Domain d4hr7e1: 4hr7 E:1-114 [222726]
Other proteins in same PDB: d4hr7a2, d4hr7a3, d4hr7b_, d4hr7c2, d4hr7c3, d4hr7d_, d4hr7e2, d4hr7e3, d4hr7f2, d4hr7f3, d4hr7g_, d4hr7i_
automated match to d1dv1a2
complexed with edo, so4

Domain d4hr7f1: 4hr7 F:1-114 [222729]
Other proteins in same PDB: d4hr7a2, d4hr7a3, d4hr7b_, d4hr7c2, d4hr7c3, d4hr7d_, d4hr7e2, d4hr7e3, d4hr7f2, d4hr7f3, d4hr7g_, d4hr7i_
automated match to d1dv1a2
complexed with edo, so4

More info for Species Escherichia coli [TaxId:562] from c.30.1.1 Biotin carboxylase (BC), N-terminal domain

Timeline for Species Escherichia coli [TaxId:562] from c.30.1.1 Biotin carboxylase (BC), N-terminal domain:

Species Escherichia coli [TaxId:562] from c.30.1.1 Biotin carboxylase (BC), N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Species Escherichia coli [TaxId:562] from c.30.1.1 Biotin carboxylase (BC) subunit of acetyl-CoA carboxylase
Species Escherichia coli [TaxId:562] from c.30.1.1 Biotin carboxylase (BC), N-terminal domain appears in SCOPe 2.06