SCOPe 2.03: Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain

Lineage for Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.28: Cryptochrome/photolyase, N-terminal domain [52424] (1 superfamily)
   3 layers: a/b/a; parallel beta-sheet of 5 strands, order 32145; Rossmann-like

4. Superfamily c.28.1: Cryptochrome/photolyase, N-terminal domain [52425] (2 families)
   automatically mapped to Pfam PF00875

5. Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain [52426] (2 proteins)

Proteins:

1. Cryptochrome [82367] (3 species)

   1. Species Mouse (Mus musculus) [TaxId:10090] [226829] (1 PDB entry)

   2. Species Synechocystis sp. PCC 6803 [TaxId:1148] [82368] (1 PDB entry)

   3. Species Thale cress (Arabidopsis thaliana) [TaxId:3702] [110496] (2 PDB entries)
      Uniprot Q43125 13-497

2. DNA photolyase [52427] (3 species)
   binds a light-harvesting cofactor

   1. Species Escherichia coli [TaxId:562] [52428] (1 PDB entry)
      cofactor is MHTF

   2. Species Synechococcus elongatus [TaxId:32046] [52429] (7 PDB entries)
      Uniprot P05327 1-474
      cofactor is HDF

   3. Species Thermus thermophilus [TaxId:274] [69460] (5 PDB entries)

More info for Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain

Timeline for Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain:

• Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain first appeared (with stable ids) in SCOP 1.55, called Family c.28.1.1: N-terminal domain of DNA photolyase
  
• Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain appears in SCOPe 2.02
  
• Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain appears in SCOPe 2.04
  
• Family c.28.1.1: Cryptochrome/photolyase, N-terminal domain appears in the current release, SCOPe 2.08