SCOPe 2.04: Family c.26.2.1: N-type ATP pyrophosphatases

Lineage for Family c.26.2.1: N-type ATP pyrophosphatases

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
   core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145

4. Superfamily c.26.2: Adenine nucleotide alpha hydrolases-like [52402] (7 families)
   share similar mode of ligand (Adenosine group) binding
   can be subdivided into two group with closer relationships within each group than between the groups; the first three families form one group whereas the last two families form the other group

5. Family c.26.2.1: N-type ATP pyrophosphatases [52403] (9 proteins)

Proteins:

1. Argininosuccinate synthetase, N-terminal domain [69458] (3 species)

   1. Species Escherichia coli [TaxId:562] [69459] (4 PDB entries)

   2. Species Thermotoga maritima [TaxId:2336] [110493] (1 PDB entry)
      Uniprot Q9X2A1

   3. Species Thermus thermophilus [TaxId:274] [75167] (7 PDB entries)

2. Asparagine synthetase B, C-terminal domain [52408] (1 species)

   • Species Escherichia coli [TaxId:562] [52409] (1 PDB entry)

3. beta-Lactam synthetase [69456] (2 species)
   Asparagine synthetase B homologue

   1. Species Pectobacterium carotovorum [TaxId:554] [102263] (2 PDB entries)
      carbapenam synthetase CarA

   2. Species Streptomyces clavuligerus [TaxId:1901] [69457] (5 PDB entries)

4. GMP synthetase, central domain [52404] (2 species)

   1. Species Escherichia coli [TaxId:562] [52405] (1 PDB entry)

   2. Species Thermus thermophilus HB8 [TaxId:300852] [255716] (2 PDB entries)

5. Hypothetical protein PH1257 [142085] (1 species)
   probable orthologue of PF0828

   • Species Pyrococcus horikoshii [TaxId:53953] [142086] (1 PDB entry)
     Uniprot O58996 2-227

6. NH3-dependent NAD+-synthetase [52406] (4 species)

   1. Species Anthrax bacillus (Bacillus anthracis) [TaxId:1392] [188002] (3 PDB entries)

   2. Species Bacillus subtilis [TaxId:1423] [52407] (7 PDB entries)

   3. Species Escherichia coli [TaxId:562] [142083] (1 PDB entry)
      Uniprot P18843 2-275

   4. Species Helicobacter pylori [TaxId:210] [142084] (1 PDB entry)
      Uniprot O25096 3-257

7. Putative N-type ATP pyrophosphatase PF0828 [102264] (1 species)

   • Species Pyrococcus furiosus [TaxId:2261] [102265] (3 PDB entries)

8. Queuosine biosynthesis protein QueC [159496] (1 species)

   • Species Erwinia carotovora [TaxId:554] [159497] (1 PDB entry)
     Uniprot Q6D820 1-230

9. automated matches [190257] (3 species)
   not a true protein

   1. Species Helicobacter pylori [TaxId:210] [188123] (2 PDB entries)

   2. Species Pyrococcus horikoshii [TaxId:53953] [187044] (1 PDB entry)

   3. Species Salmonella typhimurium [TaxId:90371] [188917] (1 PDB entry)

More info for Family c.26.2.1: N-type ATP pyrophosphatases

Timeline for Family c.26.2.1: N-type ATP pyrophosphatases:

• Family c.26.2.1: N-type ATP pyrophosphatases first appeared (with stable ids) in SCOP 1.55
  
• Family c.26.2.1: N-type ATP pyrophosphatases appears in SCOPe 2.03
  
• Family c.26.2.1: N-type ATP pyrophosphatases appears in SCOPe 2.05
  
• Family c.26.2.1: N-type ATP pyrophosphatases appears in the current release, SCOPe 2.08