SCOPe 2.07: Protein: Methionyl-tRNA synthetase (MetRS)

Lineage for Protein: Methionyl-tRNA synthetase (MetRS)

Root: SCOPe 2.07
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.26: Adenine nucleotide alpha hydrolase-like [52373] (3 superfamilies)
core: 3 layers, a/b/a ; parallel beta-sheet of 5 strands, order 32145
Superfamily c.26.1: Nucleotidylyl transferase [52374] (6 families)
Family c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain [52375] (13 proteins)
contains a conserved all-alpha subdomain at the C-terminal extension
Protein Methionyl-tRNA synthetase (MetRS) [52384] (3 species)

Species:

Escherichia coli [TaxId:562] [52386] (9 PDB entries)
1. Domain for 1f4l:
  - Domain d1f4la2: 1f4l A:4-140,A:176-388 [59649]
    Other proteins in same PDB: d1f4la1, d1f4la3
    protein/RNA complex; complexed with met, zn
2. Domain for 1p7p:
  - Domain d1p7pa2: 1p7p A:4-140,A:176-388 [94310]
    Other proteins in same PDB: d1p7pa1, d1p7pa3
    protein/RNA complex; complexed with mph, zn
3. Domain for 1pfu:
  - Domain d1pfua2: 1pfu A:4-140,A:176-388 [94658]
    Other proteins in same PDB: d1pfua1, d1pfua3
    protein/RNA complex; complexed with mpj, zn
4. Domain for 1pfv:
  - Domain d1pfva2: 1pfv A:4-140,A:176-388 [94661]
    Other proteins in same PDB: d1pfva1, d1pfva3
    protein/RNA complex; complexed with 2fm, zn
5. Domain for 1pfw:
  - Domain d1pfwa2: 1pfw A:4-140,A:176-388 [94664]
    Other proteins in same PDB: d1pfwa1, d1pfwa3
    protein/RNA complex; complexed with mf3, zn
6. Domain for 1pfy:
  - Domain d1pfya2: 1pfy A:4-140,A:176-388 [94667]
    Other proteins in same PDB: d1pfya1, d1pfya3
    protein/RNA complex; complexed with msp, zn
7. Domain for 1pg0:
  - Domain d1pg0a2: 1pg0 A:4-129,A:185-388 [94670]
    Other proteins in same PDB: d1pg0a1
    complexed with mod
8. Domain for 1pg2:
  - Domain d1pg2a2: 1pg2 A:4-125,A:185-388 [94672]
    Other proteins in same PDB: d1pg2a1
    protein/RNA complex; complexed with adn, met
9. Domain for 1qqt:
  - Domain d1qqta2: 1qqt A:3-140,A:176-388 [31590]
    Other proteins in same PDB: d1qqta1, d1qqta3
    complexed with zn
Pyrococcus abyssi [TaxId:29292] [110490] (1 PDB entry)
Uniprot Q9V011 1-606 # C-domain 616-722 is solved separately: 1MKH
- Domain for 1rqg:
  - Domain d1rqga2: 1rqg A:1-138,A:174-396 [105064]
    Other proteins in same PDB: d1rqga1, d1rqga3
    complexed with zn
Thermus thermophilus [TaxId:274] [52385] (1 PDB entry)
- Domain for 1a8h:
  - Domain d1a8ha2: 1a8h A:1-348 [31589]
    Other proteins in same PDB: d1a8ha1
    complexed with zn

More info for Protein Methionyl-tRNA synthetase (MetRS) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain

Timeline for Protein Methionyl-tRNA synthetase (MetRS) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain:

Protein Methionyl-tRNA synthetase (MetRS) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain first appeared (with stable ids) in SCOP 1.55, called Protein Methionyl-tRNA synthetase (MetR) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain
Protein Methionyl-tRNA synthetase (MetRS) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain appears in SCOPe 2.06
Protein Methionyl-tRNA synthetase (MetRS) from c.26.1.1: Class I aminoacyl-tRNA synthetases (RS), catalytic domain appears in the current release, SCOPe 2.08