Lineage for Protein: Intracellular protease

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
    3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345
  4. Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families) (S)
    conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures
  5. Family c.23.16.2: DJ-1/PfpI [52325] (10 proteins)
    contains a catalytic triad or dyad different from the class I GAT triad
  6. Protein Intracellular protease [52326] (3 species)

Species:

  1. Pyrococcus horikoshii [TaxId:53953] [52327] (3 PDB entries)
    1. Domains for 1g2i:
      1. Domain d1g2ia_: 1g2i A: [31438]
        complexed with so4
      2. Domain d1g2ib_: 1g2i B: [31439]
        complexed with so4
      3. Domain d1g2ic_: 1g2i C: [31440]
        complexed with so4
    2. Domains for 6f2f:
      1. Domain d6f2fa_: 6f2f A: [358309]
        automated match to d1g2ia_
        complexed with 2ha, 7mt, so4, tb
      2. Domain d6f2fb_: 6f2f B: [358310]
        automated match to d1g2ia_
        complexed with 2ha, 7mt, so4, tb
      3. Domain d6f2fc_: 6f2f C: [358327]
        automated match to d1g2ia_
        complexed with 2ha, 7mt, so4, tb
    3. Domains for 6f2h:
      1. Domain d6f2ha_: 6f2h A: [358244]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      2. Domain d6f2hb_: 6f2h B: [358252]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      3. Domain d6f2hc_: 6f2h C: [358253]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      4. Domain d6f2hd_: 6f2h D: [358250]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      5. Domain d6f2he_: 6f2h E: [358313]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      6. Domain d6f2hf_: 6f2h F: [358401]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      7. Domain d6f2hg_: 6f2h G: [358247]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      8. Domain d6f2hh_: 6f2h H: [358368]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      9. Domain d6f2hi_: 6f2h I: [358305]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      10. Domain d6f2hj_: 6f2h J: [358249]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      11. Domain d6f2hk_: 6f2h K: [358300]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
      12. Domain d6f2hl_: 6f2h L: [358319]
        automated match to d1g2ia_
        complexed with 7mt, iod, tb
  2. Pyrococcus horikoshii [TaxId:70601] [370077] (1 PDB entry)
  3. Pyrococcus furiosus [TaxId:2261] [419776] (1 PDB entry)

More info for Protein Intracellular protease from c.23.16.2: DJ-1/PfpI

Timeline for Protein Intracellular protease from c.23.16.2: DJ-1/PfpI: