SCOPe 2.08: Protein: Intracellular protease

Lineage for Protein: Intracellular protease

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.23: Flavodoxin-like [52171] (15 superfamilies)
3 layers, a/b/a; parallel beta-sheet of 5 strand, order 21345

Superfamily c.23.16: Class I glutamine amidotransferase-like [52317] (10 families)

conserved positions of the oxyanion hole and catalytic nucleophile; different constituent families contain different additional structures

Family c.23.16.2: DJ-1/PfpI [52325] (10 proteins)
contains a catalytic triad or dyad different from the class I GAT triad
Protein Intracellular protease [52326] (3 species)

Species:

Pyrococcus furiosus [TaxId:2261] [419776] (1 PDB entry)
- Domains for 6q3t:
  1. Domain d6q3ta_: 6q3t A: [368450]
    automated match to d1g2ia_
  2. Domain d6q3tb_: 6q3t B: [368480]
    automated match to d1g2ia_
  3. Domain d6q3tc_: 6q3t C: [368443]
    automated match to d1g2ia_
Pyrococcus horikoshii [TaxId:53953] [52327] (3 PDB entries)
1. Domains for 1g2i:
  1. Domain d1g2ia_: 1g2i A: [31438]
    complexed with so4
  2. Domain d1g2ib_: 1g2i B: [31439]
    complexed with so4
  3. Domain d1g2ic_: 1g2i C: [31440]
    complexed with so4
2. Domains for 6f2f:
  1. Domain d6f2fa_: 6f2f A: [358309]
    automated match to d1g2ia_
    complexed with 2ha, 7mt, so4, tb
  2. Domain d6f2fb_: 6f2f B: [358310]
    automated match to d1g2ia_
    complexed with 2ha, 7mt, so4, tb
  3. Domain d6f2fc_: 6f2f C: [358327]
    automated match to d1g2ia_
    complexed with 2ha, 7mt, so4, tb
3. Domains for 6f2h:
  1. Domain d6f2ha_: 6f2h A: [358244]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  2. Domain d6f2hb_: 6f2h B: [358252]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  3. Domain d6f2hc_: 6f2h C: [358253]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  4. Domain d6f2hd_: 6f2h D: [358250]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  5. Domain d6f2he_: 6f2h E: [358313]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  6. Domain d6f2hf_: 6f2h F: [358401]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  7. Domain d6f2hg_: 6f2h G: [358247]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  8. Domain d6f2hh_: 6f2h H: [358368]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  9. Domain d6f2hi_: 6f2h I: [358305]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  10. Domain d6f2hj_: 6f2h J: [358249]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  11. Domain d6f2hk_: 6f2h K: [358300]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
  12. Domain d6f2hl_: 6f2h L: [358319]
    automated match to d1g2ia_
    complexed with 7mt, iod, tb
Pyrococcus horikoshii [TaxId:70601] [370077] (1 PDB entry)
- Domains for 6hf6:
  1. Domain d6hf6a_: 6hf6 A: [370130]
    automated match to d1g2ia_
    complexed with 7mt, mli, tb
  2. Domain d6hf6b_: 6hf6 B: [370078]
    automated match to d1g2ia_
    complexed with 7mt, mli, tb
  3. Domain d6hf6c_: 6hf6 C: [370099]
    automated match to d1g2ia_
    complexed with 7mt, mli, tb

More info for Protein Intracellular protease from c.23.16.2: DJ-1/PfpI

Timeline for Protein Intracellular protease from c.23.16.2: DJ-1/PfpI:

Protein Intracellular protease from c.23.16.2: DJ-1/PfpI first appeared (with stable ids) in SCOP 1.55, called Protein Intracellular protease from c.23.16.2: Intracellular protease
Protein Intracellular protease from c.23.16.2: DJ-1/PfpI appears in SCOPe 2.07